Pre_GI: OUP Neighbours

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Query: NC_012668:2115228 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

D: 38.2417

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 358




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_017171:280762Acinetobacter baumannii MDR-ZJ06 chromosome, complete genome77.8554 %Subject Query24.4027
NC_011312:3060371*Aliivibrio salmonicida LFI1238 chromosome chromosome 1, complete80.0919 %Subject Query24.7446
NC_015497:3794000Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome75.1103 %Subject Query26.2889
NC_005140:340000Vibrio vulnificus YJ016 chromosome II, complete sequence79.4455 %Subject Query26.4713
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome75.8425 %Subject Query26.7854
NC_010999:2516000Lactobacillus casei, complete genome78.3977 %Subject Query27.1158
NC_015731:2400526*Nitrosomonas sp. Is79A3 chromosome, complete genome76.1642 %Subject Query27.4684
NC_015224:2618192*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.7341 %Subject Query27.59
NC_014334:1848340*Lactobacillus casei str. Zhang chromosome, complete genome75.2451 %Subject Query27.6265
NC_015731:169989Nitrosomonas sp. Is79A3 chromosome, complete genome76.2469 %Subject Query27.6873
NC_015222:1905194*Nitrosomonas sp. AL212 chromosome, complete genome75.9681 %Subject Query27.742
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence80.6801 %Subject Query27.8788
NC_011753:3088952*Vibrio splendidus LGP32 chromosome 1, complete genome78.3149 %Subject Query27.9102
NC_005140:960261Vibrio vulnificus YJ016 chromosome II, complete sequence79.7396 %Subject Query28.0411
NC_014966:638355Vibrio vulnificus MO6-24/O chromosome II, complete sequence78.1893 %Subject Query28.049
NC_008800:3330944Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.1409 %Subject Query28.1337
NC_016614:1178000Vibrio sp. EJY3 chromosome 2, complete sequence78.9491 %Subject Query28.148
NC_015731:1381737Nitrosomonas sp. Is79A3 chromosome, complete genome75.1134 %Subject Query28.2344
NC_010999:2450974*Lactobacillus casei, complete genome75.867 %Subject Query28.2344
NC_017162:270460Acinetobacter baumannii 1656-2 chromosome, complete genome77.6226 %Subject ←→ Query28.3475
NC_008577:3485878Shewanella sp. ANA-3 chromosome 1, complete sequence75.3646 %Subject ←→ Query28.3804
NC_017270:1755552*Vibrio cholerae LMA3984-4 chromosome chromosome I, complete83.3088 %Subject ←→ Query28.6114
NC_011415:3006794Escherichia coli SE11 chromosome, complete genome75.4779 %Subject ←→ Query28.657
NC_017328:3935185Shigella flexneri 2002017 chromosome, complete genome76.0478 %Subject ←→ Query28.6823
NC_016901:4039335Shewanella baltica OS678 chromosome, complete genome76.3603 %Subject ←→ Query28.8303
NC_008800:1459015Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.1317 %Subject ←→ Query28.8515
NC_008800:2695977Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.5239 %Subject ←→ Query28.8877
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome76.5533 %Subject ←→ Query28.9383
NC_009997:4091371Shewanella baltica OS195, complete genome76.4369 %Subject ←→ Query29.1038
NC_015222:1607757Nitrosomonas sp. AL212 chromosome, complete genome77.3284 %Subject ←→ Query29.1095
NC_010159:2440947Yersinia pestis Angola, complete genome75.1471 %Subject ←→ Query29.2315
NC_015224:2095816*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.4871 %Subject ←→ Query29.2437
NC_011663:4579777*Shewanella baltica OS223 chromosome, complete genome75.9436 %Subject ←→ Query29.268
NC_004347:3028000Shewanella oneidensis MR-1, complete genome75.3891 %Subject ←→ Query29.3045
NC_009381:3680638*Yersinia pestis Pestoides F chromosome, complete genome76.8474 %Subject ←→ Query29.347
NC_010498:4899167Escherichia coli SMS-3-5, complete genome75.2604 %Subject ←→ Query29.4018
NC_016901:2594942Shewanella baltica OS678 chromosome, complete genome75.576 %Subject ←→ Query29.4585
NC_013199:2426686Lactobacillus rhamnosus Lc 705, complete genome75.7169 %Subject ←→ Query29.5122
NC_015224:2017781Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.0766 %Subject ←→ Query29.5841
NC_014966:1668822*Vibrio vulnificus MO6-24/O chromosome II, complete sequence83.5141 %Subject ←→ Query29.5963
NC_015224:2061951*Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.7812 %Subject ←→ Query29.6
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence79.9387 %Subject ←→ Query29.7179
NC_015276:565701Marinomonas mediterranea MMB-1 chromosome, complete genome75.9038 %Subject ←→ Query29.7331
NC_014966:795311Vibrio vulnificus MO6-24/O chromosome II, complete sequence82.2212 %Subject ←→ Query29.8334
NC_013198:2458080Lactobacillus rhamnosus GG, complete genome76.2837 %Subject ←→ Query29.954
NC_004347:718091Shewanella oneidensis MR-1, complete genome77.1569 %Subject ←→ Query30.0041
NC_008322:722612Shewanella sp. MR-7, complete genome75.0184 %Subject ←→ Query30.0553
NC_009052:2512373Shewanella baltica OS155, complete genome81.4828 %Subject ←→ Query30.0584
NC_012578:1838470*Vibrio cholerae M66-2 chromosome I, complete sequence83.4283 %Subject ←→ Query30.49
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence82.2243 %Subject ←→ Query30.5138
NC_007946:2625461Escherichia coli UTI89, complete genome76.8015 %Subject ←→ Query30.6978
NC_008321:2190000Shewanella sp. MR-4, complete genome75.7261 %Subject ←→ Query30.7271
NC_008321:3232000Shewanella sp. MR-4, complete genome75.5392 %Subject ←→ Query30.7332
NC_011751:643976*Escherichia coli UMN026 chromosome, complete genome75.2543 %Subject ←→ Query30.7806
NC_016614:1543333*Vibrio sp. EJY3 chromosome 2, complete sequence78.2996 %Subject ←→ Query30.8024
NC_014966:919442Vibrio vulnificus MO6-24/O chromosome II, complete sequence81.0417 %Subject ←→ Query30.8614
NC_016901:414670Shewanella baltica OS678 chromosome, complete genome78.3088 %Subject ←→ Query30.8791
NC_015221:12389Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence75.0368 %Subject ←→ Query30.9547
NC_016945:666000Vibrio cholerae IEC224 chromosome II, complete sequence76.9485 %Subject ←→ Query31.171
NC_013198:511795Lactobacillus rhamnosus GG, complete genome76.3879 %Subject ←→ Query31.25
NC_004347:4541742Shewanella oneidensis MR-1, complete genome75.2451 %Subject ←→ Query31.2642
NC_014965:2200974Vibrio vulnificus MO6-24/O chromosome I, complete sequence80.2053 %Subject ←→ Query31.4634
NC_009457:1068000Vibrio cholerae O395 chromosome 2, complete sequence91.8689 %Subject ←→ Query31.5974
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence81.5686 %Subject ←→ Query31.6148
CU928145:4950723*Escherichia coli 55989 chromosome, complete genome76.1336 %Subject ←→ Query31.6756
NC_011748:4950723*Escherichia coli 55989, complete genome76.1336 %Subject ←→ Query31.6756
NC_009456:383819Vibrio cholerae O395 chromosome 1, complete sequence79.1299 %Subject ←→ Query31.8109
NC_017171:1331794Acinetobacter baumannii MDR-ZJ06 chromosome, complete genome76.8229 %Subject ←→ Query31.8137
NC_013199:1966334*Lactobacillus rhamnosus Lc 705, complete genome75.0398 %Subject ←→ Query31.9404
NC_016445:984856Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete95.7537 %Subject ←→ Query32.0768
NC_008149:1842500*Yersinia pestis Nepal516, complete genome76.2132 %Subject ←→ Query32.1465
NC_008800:1090000*Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,77.1906 %Subject ←→ Query32.2532
NC_008150:1705152*Yersinia pestis Antiqua, complete genome76.5196 %Subject ←→ Query32.6597
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome76.5594 %Subject ←→ Query32.7578
NC_008577:4183361Shewanella sp. ANA-3 chromosome 1, complete sequence76.3082 %Subject ←→ Query32.7699
NC_012668:62500*Vibrio cholerae MJ-1236 chromosome 1, complete sequence76.9884 %Subject ←→ Query32.8125
NC_017387:1110412Acinetobacter baumannii TCDC-AB0715 chromosome, complete genome76.3388 %Subject ←→ Query32.9472
NC_004088:2366000*Yersinia pestis KIM, complete genome75.2757 %Subject ←→ Query33.0728
NC_010498:4856011Escherichia coli SMS-3-5, complete genome77.3836 %Subject ←→ Query33.1043
NC_013364:1183000Escherichia coli O111:H- str. 11128, complete genome75.7874 %Subject ←→ Query33.1124
NC_013008:3231414Escherichia coli O157:H7 str. TW14359 chromosome, complete genome75.0766 %Subject ←→ Query33.2631
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence80.2053 %Subject ←→ Query33.3414
NC_012667:504534Vibrio cholerae MJ-1236 chromosome 2, complete genome79.5527 %Subject ←→ Query33.3753
NC_013361:3287671Escherichia coli O26:H11 str. 11368 chromosome, complete genome77.9197 %Subject ←→ Query33.5087
NC_002505:2537655*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete76.8382 %Subject ←→ Query33.5512
NC_004460:1237129Vibrio vulnificus CMCP6 chromosome II, complete sequence79.3903 %Subject ←→ Query33.7123
NC_016944:1504888Vibrio cholerae IEC224 chromosome I, complete sequence94.4884 %Subject ←→ Query33.995
NC_013421:1819036Pectobacterium wasabiae WPP163, complete genome78.1464 %Subject ←→ Query34.0279
NC_015276:2023663Marinomonas mediterranea MMB-1 chromosome, complete genome75.7904 %Subject ←→ Query34.0303
NC_008800:1300500Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,77.6134 %Subject ←→ Query34.0771
NC_012583:861225Vibrio cholerae O395 chromosome chromosome II, complete sequence80.3646 %Subject ←→ Query34.0915
NC_016602:103878*Vibrio furnissii NCTC 11218 chromosome 1, complete sequence76.1673 %Subject ←→ Query34.1136
NC_010465:3431500*Yersinia pseudotuberculosis YPIII, complete genome76.1979 %Subject ←→ Query34.3332
NC_012583:683887Vibrio cholerae O395 chromosome chromosome II, complete sequence82.0956 %Subject ←→ Query34.4236
NC_016445:2663837Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete81.5441 %Subject ←→ Query34.4467
NC_008577:2818546*Shewanella sp. ANA-3 chromosome 1, complete sequence75.9069 %Subject ←→ Query34.4531
NC_008800:2127918*Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.1991 %Subject ←→ Query34.4723
NC_012580:796387Vibrio cholerae M66-2 chromosome II, complete sequence80.4075 %Subject ←→ Query34.4761
NC_008800:36500*Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.2328 %Subject ←→ Query34.5696
NC_016445:89500Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete78.0607 %Subject ←→ Query34.6333
NC_015559:2434000*Marinomonas posidonica IVIA-Po-181 chromosome, complete genome76.4583 %Subject ←→ Query34.7215
NC_016945:822229Vibrio cholerae IEC224 chromosome II, complete sequence80.3738 %Subject ←→ Query34.885
NC_008800:2448583*Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.9406 %Subject ←→ Query34.889
NC_002506:822401Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete80.3799 %Subject ←→ Query34.9693
NC_012578:1465302Vibrio cholerae M66-2 chromosome I, complete sequence94.1912 %Subject ←→ Query34.9943
NC_011748:2973968*Escherichia coli 55989, complete genome75.0031 %Subject ←→ Query35.0181
CU928145:2973968*Escherichia coli 55989 chromosome, complete genome75.0031 %Subject ←→ Query35.0181
NC_017160:396600Yersinia pestis D182038 chromosome, complete genome75.2941 %Subject ←→ Query35.1775
NC_017027:1329708Pasteurella multocida subsp. multocida str. HN06 chromosome,75.5515 %Subject ←→ Query35.2079
NC_002655:5382557Escherichia coli O157:H7 EDL933, complete genome75.5116 %Subject ←→ Query35.2313
NC_010554:2646806Proteus mirabilis HI4320, complete genome82.114 %Subject ←→ Query35.3988
NC_012668:368305*Vibrio cholerae MJ-1236 chromosome 1, complete sequence80.5668 %Subject ←→ Query35.5397
NC_013941:4470932Escherichia coli O55:H7 str. CB9615 chromosome, complete genome75.2451 %Subject ←→ Query35.5738
NC_016446:522936Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete80.3738 %Subject ←→ Query35.6205
NC_008149:318860Yersinia pestis Nepal516, complete genome75.769 %Subject ←→ Query35.7355
NC_008800:2013450*Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,75.5882 %Subject ←→ Query35.7481
NC_004459:1679335*Vibrio vulnificus CMCP6 chromosome I, complete sequence77.6716 %Subject ←→ Query35.7874
NC_005810:4306716Yersinia pestis biovar Microtus str. 91001, complete genome75.5515 %Subject ←→ Query35.7971
NC_016944:238580*Vibrio cholerae IEC224 chromosome I, complete sequence80.8303 %Subject ←→ Query35.8534
NC_012691:2097287*Tolumonas auensis DSM 9187, complete genome77.1691 %Subject ←→ Query35.9123
NC_012667:46432*Vibrio cholerae MJ-1236 chromosome 2, complete genome81.5135 %Subject ←→ Query35.9314
NC_002695:5352554Escherichia coli O157:H7 str. Sakai, complete genome75.4841 %Subject ←→ Query35.959
NC_009456:998935*Vibrio cholerae O395 chromosome 1, complete sequence80.962 %Subject ←→ Query36.0218
NC_013457:979102*Vibrio sp. Ex25 chromosome 2, complete genome75.9988 %Subject ←→ Query36.055
NC_015224:1391088Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,75.5607 %Subject ←→ Query36.0736
NC_008321:3964414Shewanella sp. MR-4, complete genome75.0766 %Subject ←→ Query36.1551
NC_012582:272320Vibrio cholerae O395 chromosome chromosome I, complete sequence80.5944 %Subject ←→ Query36.1945
NC_004547:3207776*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.6342 %Subject ←→ Query36.2193
NC_013971:1660144*Erwinia amylovora ATCC 49946 chromosome, complete genome75.7108 %Subject ←→ Query36.2459
NC_003143:398748Yersinia pestis CO92, complete genome75.2941 %Subject ←→ Query36.4557
NC_013961:851044*Erwinia amylovora, complete genome76.1795 %Subject ←→ Query36.5306
NC_012668:160357Vibrio cholerae MJ-1236 chromosome 1, complete sequence83.7837 %Subject ←→ Query36.6506
NC_012667:703852Vibrio cholerae MJ-1236 chromosome 2, complete genome80.8732 %Subject ←→ Query36.7099
NC_017154:394401Yersinia pestis D106004 chromosome, complete genome75.2543 %Subject ←→ Query36.7396
NC_010995:4525119Cellvibrio japonicus Ueda107, complete genome75.6495 %Subject ←→ Query36.7553
NC_014029:452248Yersinia pestis Z176003 chromosome, complete genome75.2941 %Subject ←→ Query36.8382
NC_012580:207025*Vibrio cholerae M66-2 chromosome II, complete sequence82.6471 %Subject ←→ Query36.8634
NC_012691:779826*Tolumonas auensis DSM 9187, complete genome75.7261 %Subject ←→ Query36.9103
NC_014010:1850500Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete77.2089 %Subject ←→ Query36.9283
NC_012583:242760*Vibrio cholerae O395 chromosome chromosome II, complete sequence83.03 %Subject ←→ Query36.9645
NC_016602:2037162*Vibrio furnissii NCTC 11218 chromosome 1, complete sequence75.1777 %Subject ←→ Query37.0927
NC_015224:1763848Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,76.7739 %Subject ←→ Query37.1095
NC_016602:2292518Vibrio furnissii NCTC 11218 chromosome 1, complete sequence75.1593 %Subject ←→ Query37.1565
NC_016446:979884*Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete82.6593 %Subject ←→ Query37.3254
NC_013008:3761467Escherichia coli O157:H7 str. TW14359 chromosome, complete genome75.2359 %Subject ←→ Query37.6158
NC_010159:1288000Yersinia pestis Angola, complete genome75.8272 %Subject ←→ Query37.7291
NC_006370:847204Photobacterium profundum SS9 chromosome 1, complete sequence75.6893 %Subject ←→ Query37.8101
NC_002506:207097*Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete82.6471 %Subject ←→ Query37.898
NC_003134:64672Yersinia pestis CO92 plasmid pMT1, complete sequence75.0551 %Subject ←→ Query37.9969
NC_011741:4570498*Escherichia coli IAI1 chromosome, complete genome76.204 %Subject ←→ Query38.0654
NC_016945:207089*Vibrio cholerae IEC224 chromosome II, complete sequence82.5827 %Subject ←→ Query38.0893
NC_004349:3938Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence77.6287 %Subject ←→ Query38.1809
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete80.0429 %Subject ←→ Query38.3098
NC_007384:2007467Shigella sonnei Ss046, complete genome75.769 %Subject ←→ Query38.3188
NC_009381:1064227Yersinia pestis Pestoides F chromosome, complete genome75.8946 %Subject ←→ Query38.6069
NC_010634:4463727Yersinia pseudotuberculosis PB1/+, complete genome76.348 %Subject ←→ Query38.8379
NC_016602:1994110Vibrio furnissii NCTC 11218 chromosome 1, complete sequence76.9148 %Subject ←→ Query38.9184
NC_007712:1219957Sodalis glossinidius str. 'morsitans', complete genome75.1624 %Subject ←→ Query39.2078
NC_017162:1228723Acinetobacter baumannii 1656-2 chromosome, complete genome75.6036 %Subject ←→ Query39.8739
NC_016628:537137Vibrio furnissii NCTC 11218 chromosome 2, complete sequence77.2089 %Subject ←→ Query39.9714
NC_009801:1392696Escherichia coli E24377A, complete genome75.818 %Subject ←→ Query40.1617
NC_012668:442601*Vibrio cholerae MJ-1236 chromosome 1, complete sequence80.4412 %Subject ←→ Query40.2029
NC_011601:2139188*Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome75.625 %Subject ←→ Query41.1535
NC_015554:4724245*Alteromonas sp. SN2 chromosome, complete genome78.3088 %Subject ←→ Query42.0329
NC_016602:173314Vibrio furnissii NCTC 11218 chromosome 1, complete sequence80.913 %Subject ←→ Query42.0404
NC_002655:4653160Escherichia coli O157:H7 EDL933, complete genome75.1685 %Subject ←→ Query42.393
CU928160:4570498*Escherichia coli IAI1 chromosome, complete genome76.204 %Subject ←→ Query43.1129
NC_011353:4688000Escherichia coli O157:H7 str. EC4115 chromosome, complete genome75.0092 %Subject ←→ Query43.1789
NC_002655:3769643*Escherichia coli O157:H7 EDL933, complete genome75.1562 %Subject ←→ Query43.1795
NC_016628:763833Vibrio furnissii NCTC 11218 chromosome 2, complete sequence79.3995 %Subject ←→ Query43.5211
NC_011751:3285646*Escherichia coli UMN026 chromosome, complete genome75.4718 %Subject ←→ Query43.64
NC_002695:3702344*Escherichia coli O157:H7 str. Sakai, complete genome75.1838 %Subject ←→ Query43.9329
NC_011353:3805819*Escherichia coli O157:H7 str. EC4115 chromosome, complete genome75.2451 %Subject ←→ Query43.9502
NC_010694:2138000Erwinia tasmaniensis, complete genome75.2788 %Subject ←→ Query44.7597
NC_012917:1840172*Pectobacterium carotovorum subsp. carotovorum PC1, complete genome75.095 %Subject ←→ Query45.0216
NC_012214:2221702*Erwinia pyrifoliae Ep1/96, complete genome75.4779 %Subject ←→ Query46.3016
NC_013961:1622616*Erwinia amylovora, complete genome75.7169 %Subject ←→ Query46.386
NC_004547:1174650*Erwinia carotovora subsp. atroseptica SCRI1043, complete genome76.1949 %Subject ←→ Query48.0379
NC_010611:240839Acinetobacter baumannii ACICU, complete genome75.144 %Subject ←→ Query48.2217