Pre_GI Gene

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Host: NC_008800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008800:2448583 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
244858324512582676bifunctional acetaldehyde-CoAalcohol dehydrogenaseQuickGO ontologyBLASTP
24517582452357600thymidine kinaseQuickGO ontologyBLASTP
24523272452599273hypothetical proteinBLASTP
24531102453520411global DNA-binding transcriptional dual regulator H-NSQuickGO ontologyBLASTP
245390324552521350putative nucleotide sugar dehydrogenaseQuickGO ontologyBLASTP
245557424565901017response regulator of RpoSQuickGO ontologyBLASTP
24566922457594903hypothetical proteinBLASTP
24579142458324411hypothetical proteinBLASTP
24589632459427465hypothetical proteinBLASTP
24595092460357849formyltetrahydrofolate deformylaseQuickGO ontologyBLASTP
2460533246061785tRNA-TyrQuickGO ontologyBLASTP
24614462462306861LysR family transcriptional regulatorQuickGO ontologyBLASTP
24630862463892807exonuclease IIIQuickGO ontologyBLASTP
24639762464362387pyrimidine deoxynucleoside triphosphate pyrophosphohydrolaseQuickGO ontologyBLASTP
24643672464657291hypothetical proteinBLASTP
246465424665821929DNA topoisomerase IIIQuickGO ontologyBLASTP
246662624676721047selenophosphate synthetaseQuickGO ontologyBLASTP