Pre_GI Gene

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Host: NC_005140 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005140:340000 Vibrio vulnificus YJ016 chromosome II, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
340074340421348hypothetical protein
3404283424522025subtilisin-like serine proteaseQuickGO ontologyBLASTP
3428933441461254phospholipasehemolysinQuickGO ontologyBLASTP
34442234561511942-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
3456593466901032L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
346762347259498hypothetical proteinBLASTP
347285347815531hypothetical proteinBLASTP
347412347540129hypothetical protein
348096348596501hypothetical proteinBLASTP
348674349084411hypothetical proteinBLASTP
349123349656534hypothetical proteinBLASTP
349791350399609hypothetical proteinBLASTP
350458350901444RelB proteinQuickGO ontologyBLASTP
350898351176279plasmid stabilization system proteinQuickGO ontologyBLASTP
3513233523391017hypothetical proteinBLASTP
352550353017468hypothetical protein
353952354539588hypothetical proteinBLASTP
356081356623543bacterial lipocalinQuickGO ontologyBLASTP
356814357542729outer membrane protein VQuickGO ontologyBLASTP
3577573589411185Zn-dependent hydrolaseQuickGO ontologyBLASTP
359000359944945transcriptional regulatorQuickGO ontologyBLASTP
360016360858843hypothetical proteinBLASTP
3608033623291527hypothetical proteinBLASTP