Pre_GI Gene

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Host: NC_016445 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016445:984856 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9848569864271572carboxypeptidase TaqQuickGO ontologyBLASTP
986628986849222hcp proteinQuickGO ontologyBLASTP
986816987145330hcp proteinQuickGO ontologyBLASTP
9872739907643492type VI secretion system secreted protein VgrGQuickGO ontologyBLASTP
990743991603861hypothetical proteinBLASTP
9916069935311926hypothetical proteinBLASTP
993528994271744hypothetical proteinBLASTP
994416995153738hypothetical proteinBLASTP
995241995879639hypothetical proteinBLASTP
9959529973281377alanine or glycinecation symporter AGCS familyQuickGO ontologyBLASTP
997831997989159hypothetical proteinBLASTP
998006998740735hypothetical proteinBLASTP
9988879999241038spermidineputrescine transport system substrate-binding proteinQuickGO ontologyBLASTP
100003610010671032spermidineputrescine ABC transporter periplasmic spermidineputrescine-binding proteinQuickGO ontologyBLASTP
10011701001940771spermidineputrescine ABC transporter membrane proteinQuickGO ontologyBLASTP
10019401002800861spermidineputrescine ABC transporter membrane proteinQuickGO ontologyBLASTP
100278110038961116putrescinespermidine ABC transporter ATPase proteinQuickGO ontologyBLASTP
10042391005045807hypothetical proteinBLASTP
10050381005838801Bax proteinQuickGO ontologyBLASTP