Pre_GI Gene

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Host: NC_008800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008800:36500 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
36607380161410glutamine synthetaseQuickGO ontologyBLASTP
3820138311111hypothetical protein
38529403521824putative GTPaseQuickGO ontologyBLASTP
4064841235588phosphataseQuickGO ontologyBLASTP
4132842218891ribonuclease BNQuickGO ontologyBLASTP
4222542662438D-tyrosyl-tRNATyr deacylaseQuickGO ontologyBLASTP
4291443837924hypothetical proteinBLASTP
4443145117687LuxR family transcription regulatory proteinQuickGO ontologyBLASTP
4514745833687LuxR family transcription regulatory proteinQuickGO ontologyBLASTP
4586346549687LuxR family transcription regulatory proteinQuickGO ontologyBLASTP
4657947265687LuxR family transcription regulatory proteinQuickGO ontologyBLASTP
4729447980687LuxR family transcription regulatory proteinQuickGO ontologyBLASTP
48077497861710hypothetical proteinBLASTP
49933513181386putative membrane permeaseQuickGO ontologyBLASTP
51557527711215sodiumglutamate symport carrier proteinQuickGO ontologyBLASTP
52840549212082ATP-dependent DNA helicase RecGQuickGO ontologyBLASTP
5492255614693tRNA guanosine-2-O-methyltransferaseQuickGO ontologyBLASTP
55620577222103bifunctional pppGpp synthetase II guanosine-35-bis pyrophosphate 3-pyrophosphohydrolaseQuickGO ontologyBLASTP
5774158016276DNA-directed RNA polymerase subunit omegaQuickGO ontologyBLASTP
5807158694624guanylate kinaseQuickGO ontologyBLASTP
58977606741698NAD-dependent DNA ligase LigBQuickGO ontologyBLASTP