Pre_GI Gene

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Host: NC_012580 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012580:207025 Vibrio cholerae M66-2 chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae M66-2 was isolated from the 1937 cholera outbreak in the Makassar area of Indonesia. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2070252085091485hypothetical proteinBLASTP
208498209493996D-lactate dehydrogenaseQuickGO ontologyBLASTP
2096762110191344NaH antiporterQuickGO ontologyBLASTP
211021211863843potassium channel proteinQuickGO ontologyBLASTP
211929212477549hypothetical proteinBLASTP
212593212970378hypothetical proteinBLASTP
2131352141781044guanosine 5-monophosphate oxidoreductaseQuickGO ontologyBLASTP
2145022156531152site-specific DNA-methyltransferaseQuickGO ontologyBLASTP
2157772176931917hypothetical proteinBLASTP
2176862188101125hypothetical proteinBLASTP
218807219685879hypothetical proteinBLASTP
219753220190438IS1004 transposaseQuickGO ontologyBLASTP
2206952220501356ATP-dependent RNA helicase RhlEQuickGO ontologyBLASTP
2222402235681329anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
223818224648831NAD synthetaseQuickGO ontologyBLASTP
224751225278528nicotinic acid mononucleotide adenylyltransferaseQuickGO ontologyBLASTP
225229225411183hypothetical proteinBLASTP
2255182270861569response regulatorQuickGO ontologyBLASTP
2271442290901947sensory box sensor histidine kinaseQuickGO ontologyBLASTP
229340230314975hypothetical proteinBLASTP
2303922319811590hypothetical proteinBLASTP