Pre_GI Gene

Some Help

Host: NC_008526 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008526:74500 Lactobacillus casei ATCC 334, complete genome

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
75083762221140hypothetical protein
76354781801827permease of the major facilitator superfamilyQuickGO ontologyBLASTP
7833978917579Transcriptional regulatorQuickGO ontologyBLASTP
7904079414375hypothetical protein
7939880120723hypothetical protein
8033980848510hypothetical protein
8091681110195hypothetical protein
8113581641507hypothetical protein
8220682322117hypothetical protein
8267783027351hypothetical protein
8348884300813hypothetical protein
8429784833537hypothetical protein
8482685455630ABC-type multidrug transport system ATPase componentQuickGO ontology
85485865011017Transposase IS30 familyQuickGO ontologyBLASTP
8658687134549hypothetical protein
8732188088768Dihydrodipicolinate reductaseQuickGO ontologyBLASTP
8808588990906Dihydrodipicolinate synthaseN-acetylneuraminate lyaseQuickGO ontologyBLASTP
89134902851152Metal-dependent amidaseaminoacylasecarboxypeptidaseQuickGO ontologyBLASTP
9029390997705Tetrahydrodipicolinate N-succinyltransferaseQuickGO ontologyBLASTP
91008923541347Diaminopimelate decarboxylaseQuickGO ontologyBLASTP
93067944461380AspartokinaseQuickGO ontologyBLASTP
94448954551008Diaminopimelate epimeraseQuickGO ontologyBLASTP
95459965171059Aspartate-semialdehyde dehydrogenaseQuickGO ontologyBLASTP
9651096653144hypothetical proteinBLASTP
9671397090378hypothetical proteinBLASTP
9737797790414ADP-ribose pyrophosphataseQuickGO ontologyBLASTP
9778398649867permease of the drugmetabolite transporter DMT superfamilyQuickGO ontologyBLASTP
991401007681629ABC-type multidrug transport system ATPase and permease componentQuickGO ontologyBLASTP
101336101923588Phospholipase A2 family enzymeQuickGO ontologyBLASTP
102009102308300hypothetical proteinBLASTP
1025741039891416hypothetical proteinBLASTP
104011104658648Transcriptional regulatorQuickGO ontologyBLASTP
104795105751957hypothetical protein
105754105951198hypothetical protein
105967106494528hypothetical protein
106655107590936ABC-type multidrug transport system ATPase componentQuickGO ontologyBLASTP
1078121098182007Signaling protein consists of PAS a modified GGDEF and a DHH family phosphatase domainsQuickGO ontologyBLASTP
109834110289456Ribosomal protein L9QuickGO ontologyBLASTP
1105311119191389Replicative DNA helicaseQuickGO ontologyBLASTP
1119851131481164hypothetical proteinBLASTP
1135971155881992sucrose-specific PTS system IIBC componentQuickGO ontologyBLASTP
115575116504930Predicted sugar phosphate isomeraseQuickGO ontologyBLASTP