Pre_GI Gene

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Host: NC_008800 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008800:2013450 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2013450201353586tRNA-LeuQuickGO ontologyBLASTP
2013546201361974tRNA-CysQuickGO ontologyBLASTP
2013670201374576tRNA-GlyQuickGO ontology
20138902014438549phosphatidylglycerophosphate synthetaseQuickGO ontologyBLASTP
201449720163291833excinuclease ABC subunit CQuickGO ontologyBLASTP
20163222016978657response regulatorQuickGO ontologyBLASTP
20176702017894225hypothetical proteinBLASTP
20180062018344339hypothetical proteinBLASTP
20183752018629255hypothetical proteinBLASTP
20194712019890420putative DNA-binding proteinQuickGO ontologyBLASTP
20202212020403183phage-like proteinQuickGO ontologyBLASTP
20208292021248420phage antitermination proteinQuickGO ontologyBLASTP
20214262021602177hypothetical proteinBLASTP
20218292022005177hypothetical proteinBLASTP
20220072022489483bacteriophage lysozymeQuickGO ontologyBLASTP
20228622023746885lipaseQuickGO ontologyBLASTP
2024540202541287323S rRNA pseudouridine synthase FQuickGO ontologyBLASTP
20267852027630846putative inner membrane proteinQuickGO ontologyBLASTP
20278652028122258hypothetical protein
202828420293241041putative inner membrane proteinQuickGO ontologyBLASTP
20295062030141636putative transferaseQuickGO ontologyBLASTP
20302112030759549putative acetyl transferaseQuickGO ontologyBLASTP
20312672031500234hypothetical proteinBLASTP
20322232032612390hypothetical proteinBLASTP
20327302032972243hypothetical proteinBLASTP
203308520347941710hypothetical proteinBLASTP