Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:1966334 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19663341967041708hypothetical proteinBLASTP
19673491967558210hypothetical protein
19675531967864312DNA-binding protein xre familyQuickGO ontologyBLASTP
19690891969478390predicted ORFQuickGO ontology
19695121969667156predicted ORFQuickGO ontology
196969819712691572predicted ORFQuickGO ontologyBLASTP
19714971972342846predicted ORFQuickGO ontology
197275619739941239Abi-alpha proteinQuickGO ontologyBLASTP
1974848197493184predicted ORFQuickGO ontology
197502519761041080predicted ORFQuickGO ontology
19766641977575912abortive phage resistance proteinQuickGO ontologyBLASTP
197781519793681554bifunctional GMP synthaseglutamine amidotransferase proteinQuickGO ontologyBLASTP
19795501980476927pantothenate kinase Rts proteinQuickGO ontologyBLASTP
19807921981142351hypothetical proteinBLASTP
19811921981479288hypothetical proteinBLASTP
198152819829371410dipeptidase A Cysteine peptidase MEROPS family C69QuickGO ontologyBLASTP
19834401983592153predicted ORFQuickGO ontology
19839211984415495cytosolic long-chain acyl-CoA thioester hydrolase family proteinQuickGO ontologyBLASTP
198440219866932292superfamily I DNA and RNA helicase-like proteinQuickGO ontologyBLASTP
19867281986946219predicted ORFQuickGO ontologyBLASTP
19869611987116156predicted ORFQuickGO ontologyBLASTP
19871251987322198hypothetical protein
198739419892231830Kef-type K transport system membrane componentQuickGO ontologyBLASTP