Pre_GI Gene

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Host: NC_002506 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002506:207097 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2070972085811485hypothetical proteinBLASTP
208570209565996D-lactate dehydrogenaseQuickGO ontologyBLASTP
2097482110911344NaH antiporter putativeQuickGO ontologyBLASTP
211093211935843potassium channel protein putativeQuickGO ontologyBLASTP
212001212549549hypothetical proteinBLASTP
212665213042378hypothetical proteinBLASTP
2132072142501044guanosine 5-monophosphate oxidoreductaseQuickGO ontologyBLASTP
2145742157251152site-specific DNA-methyltransferase putativeQuickGO ontologyBLASTP
2158492177651917hypothetical proteinBLASTP
2177582188821125hypothetical proteinBLASTP
218879219757879hypothetical proteinBLASTP
219825220262438IS1004 transposaseQuickGO ontologyBLASTP
2207672221221356ATP-dependent RNA helicase RhlEQuickGO ontologyBLASTP
2223122236401329anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
223751223882132hypothetical proteinBLASTP
223891224721831NAD synthetaseQuickGO ontologyBLASTP
224824225351528nicotinic acid mononucleotide adenylyltransferaseQuickGO ontologyBLASTP
225302225484183hypothetical proteinBLASTP
2255912271591569response regulator putativeQuickGO ontologyBLASTP
2272172291631947sensory box sensor histidine kinaseQuickGO ontologyBLASTP
2293382303871050hypothetical proteinBLASTP
2304652320541590hypothetical proteinBLASTP