Pre_GI Gene

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Host: NC_009456 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009456:383819 Vibrio cholerae O395 chromosome 1, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
383080383841762LuxR family transcriptional regulatorQuickGO ontologyBLASTP
383819384679861chaperone protein HchAQuickGO ontologyBLASTP
38499938619211942-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
3861953872261032L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
3883233893841062hypothetical proteinBLASTP
3894353905441110hypothetical proteinBLASTP
3905573916211065hypothetical proteinBLASTP
391633392028396hypothetical proteinBLASTP
392053392433381hypothetical proteinBLASTP
393062393223162integrase-related proteinQuickGO ontologyBLASTP
3933313944071077putative hydrolaseQuickGO ontologyBLASTP
394707395651945DNA-binding transcriptional regulator DsdCQuickGO ontologyBLASTP
3958593971841326D-serine dehydrataseQuickGO ontologyBLASTP
397401397604204hypothetical proteinBLASTP
3984263995621137cytochrome d ubiquinol oxidase subunit IIQuickGO ontologyBLASTP
3995754011671593cytochrome d ubiquinol oxidase subunit IQuickGO ontologyBLASTP
401106401228123hypothetical protein
4012964027171422GntR family transcriptional regulatorQuickGO ontologyBLASTP
402952403902951D-alanyl-D-alanine endopeptidaseQuickGO ontologyBLASTP