Pre_GI Gene

Some Help

Host: NC_012583 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012583:683887 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
683887684120234hypothetical proteinBLASTP
6842016858981698hypothetical proteinBLASTP
685999686106108hypothetical protein
686268687245978ISVch1 transposaseQuickGO ontologyBLASTP
6872566893522097heme transport protein HutAQuickGO ontologyBLASTP
689570690457888transcriptional regulator LysR familyQuickGO ontologyBLASTP
6905076931882682hypothetical proteinBLASTP
693395693982588DamX-related proteinQuickGO ontologyBLASTP
694133695122990D-alanine--D-alanine ligaseQuickGO ontologyBLASTP
695308695691384hypothetical proteinBLASTP
695699696010312Sui1 family proteinQuickGO ontologyBLASTP
696423696797375cholera enterotoxin B subunitQuickGO ontologyBLASTP
696794697570777cholera enterotoxin A subunitQuickGO ontologyBLASTP
6976906988891200zona occludens toxinQuickGO ontologyBLASTP
698886699176291accessory cholera enterotoxinQuickGO ontologyBLASTP
699176699919744orfUQuickGO ontologyBLASTP
700470700718249colonization factorQuickGO ontologyBLASTP
700854701231378RstB2 proteinQuickGO ontologyBLASTP
7012127022911080RstA2 proteinQuickGO ontologyBLASTP
702423702758336cryptic phage CTXphi transcriptional repressor RstR classicalQuickGO ontologyBLASTP
703228703380153hypothetical proteinBLASTP
703661703822162hypothetical proteinBLASTP
7038637050291167hypothetical proteinBLASTP
705090705980891hypothetical proteinBLASTP
705977706714738transcriptional regulatorQuickGO ontologyBLASTP
7066087081071500sensor histidine kinaseQuickGO ontologyBLASTP