Pre_GI Gene

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Host: NC_004459 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004459:1679335 Vibrio vulnificus CMCP6 chromosome I, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Pathogen in immunocompromised patients. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
167933516820582724translation initiation factor IF-2QuickGO ontologyBLASTP
16821581682553396ribosome-binding factor AQuickGO ontologyBLASTP
16825531683497945tRNA pseudouridine synthase BQuickGO ontologyBLASTP
16836291684276648hypothetical proteinBLASTP
16843231684952630Transposase and inactivated derivativesQuickGO ontologyBLASTP
1685092168536127030S ribosomal protein S15QuickGO ontologyBLASTP
168563316891903558Superfamily II DNA helicaseQuickGO ontologyBLASTP
16893341689930597hypothetical proteinBLASTP
16899801690732753hypothetical proteinBLASTP
16907591691523765hypothetical proteinBLASTP
16915731692328756hypothetical proteinBLASTP
169283316949592127Polyribonucleotide nucleotidyltransferaseQuickGO ontologyBLASTP
16950801695988909Lipoprotein NlpIQuickGO ontologyBLASTP
16961641696577414Transcriptional regulatorQuickGO ontologyBLASTP
169660816979391332Na-driven multidrug efflux pumpQuickGO ontologyBLASTP
16980301698908879CollagenaseQuickGO ontologyBLASTP
169892616999391014CollagenaseQuickGO ontologyBLASTP
170006617019551890c-di-GMP phosphodiesterase A-related proteinQuickGO ontologyBLASTP
17023731702900528Putative lipid carrier proteinQuickGO ontologyBLASTP
17028841703387504Predicted acetyltransferaseQuickGO ontologyBLASTP
17035291703930402DNA polymerase III subunit psiQuickGO ontologyBLASTP
17039461704389444Ribosomal-protein-alanine acetyltransferaseQuickGO ontologyBLASTP
170436117064242064c-di-GMP phosphodiesterase A-related proteinQuickGO ontologyBLASTP