Pre_GI Gene

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Host: NC_009456 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009456:998935 Vibrio cholerae O395 chromosome 1, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
99893510005031569putative response regulatorQuickGO ontologyBLASTP
10007431001270528nicotinic acid mononucleotide adenylyltransferaseQuickGO ontologyBLASTP
10013731002203831NAD synthetaseQuickGO ontologyBLASTP
10022121002343132hypothetical proteinBLASTP
100245410037821329anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
100397210053271356ATP-dependent RNA helicase RhlEQuickGO ontologyBLASTP
10058321006269438IS1004 transposaseQuickGO ontologyBLASTP
10063371007215879hypothetical proteinBLASTP
100721210083361125hypothetical proteinBLASTP
100832910102451917hypothetical proteinBLASTP
101036910115201152putative site-specific DNA-methyltransferaseQuickGO ontologyBLASTP
10118441012065222GMP reductaseQuickGO ontologyBLASTP
10123511012482132hypothetical protein
10127301012885156hypothetical protein
101286210144931632hypothetical proteinBLASTP
10144901014963474hypothetical proteinBLASTP
10149511015844894hypothetical proteinBLASTP
10158471016371525hypothetical proteinBLASTP
101637110182091839hypothetical proteinBLASTP
10182061018865660hypothetical proteinBLASTP
101886210200611200hypothetical proteinBLASTP
10200581020390333hypothetical proteinBLASTP
102038010221971818phage tail tape measure family proteinQuickGO ontologyBLASTP
10222091022343135hypothetical protein
10223941022675282hypothetical protein
10226721022812141hypothetical protein
10228831023179297hypothetical protein