Pre_GI Gene

Some Help

Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:4856011 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
48560114856514504IS1 transposase orfBQuickGO ontologyBLASTP
48565254856737213IS1 transposase orfAQuickGO ontologyBLASTP
48569814857478498addiction module antitoxinQuickGO ontology
485754548595241980type I restriction-modification system DNA methylaseQuickGO ontologyBLASTP
485952448608101287type I restriction modification DNA specificity domain-containing proteinQuickGO ontologyBLASTP
486081048640463237type I restriction-modification system endonucleaseQuickGO ontologyBLASTP
48640464864600555hypothetical proteinBLASTP
48646034865442840hypothetical proteinBLASTP
486547848665121035hypothetical proteinBLASTP
48665704866956387hypothetical protein
48670464867246201hypothetical protein
48677514868083333hypothetical protein
48690804869703624hypothetical proteinBLASTP
48698864870776891IS1203 transposase orfBQuickGO ontologyBLASTP
48707574871098342IS1203 transposase orfAQuickGO ontologyBLASTP
48711044871403300hypothetical proteinBLASTP
48717354872100366hypothetical proteinBLASTP
487220748734151209IS10 transposaseQuickGO ontologyBLASTP
48733944874056663hypothetical proteinBLASTP
48740664874674609hypothetical proteinBLASTP
48752644875776513hypothetical proteinBLASTP
48758584875995138hypothetical protein
48760334876266234AlpA family transcriptional regulatorQuickGO ontologyBLASTP