Pre_GI Gene

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Host: NC_016446 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016446:522936 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5229365243541419GntR family transcriptional regulatorQuickGO ontologyBLASTP
5244955260751581cytochrome bd-I oxidase subunit IQuickGO ontologyBLASTP
5260885272241137cytochrome d ubiquinol oxidase subunit IIQuickGO ontologyBLASTP
528046528249204hypothetical proteinBLASTP
5284665297881323D-serine dehydrataseQuickGO ontologyBLASTP
529999530943945DNA-binding transcriptional regulator DsdCQuickGO ontologyBLASTP
5312435323191077choloylglycine hydrolaseQuickGO ontologyBLASTP
532427532588162integrase-related proteinQuickGO ontologyBLASTP
5340295350931065hypothetical proteinBLASTP
5351065362151110hypothetical proteinBLASTP
5362665373271062hypothetical proteinBLASTP
537462537635174hypothetical proteinBLASTP
5384245394551032L-threonine 3-dehydrogenaseQuickGO ontologyBLASTP
53945854065111942-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
541219541830612molecular chaperone HchA Hsp31QuickGO ontologyBLASTP
541850542569720transcriptional regulator LuxR familyQuickGO ontologyBLASTP
542669543607939LysR family transcriptional regulatorQuickGO ontologyBLASTP
543601543984384glyoxylase I family proteinQuickGO ontologyBLASTP
5440625454741413iron-uptake factor PiuBQuickGO ontologyBLASTP