Pre_GI Gene

Some Help

Host: NC_004349 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004349:3938 Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
393856501713type II DNA modification methyltransferaseQuickGO ontologyBLASTP
57146019306hypothetical protein
60376813777ParA family proteinQuickGO ontologyBLASTP
71137850738hypothetical protein
78408559720hypothetical protein
85738818246hypothetical protein
88059323519hypothetical protein
94659707243hypothetical proteinBLASTP
97429948207hypothetical protein
10078113341257SOS mutagenesis protein RulBQuickGO ontologyBLASTP
1133511739405SOS mutagenesis protein RulAQuickGO ontologyBLASTP
123321242796hypothetical protein
1273212878147hypothetical protein
12945159112967ISSod9 transposaseQuickGO ontologyBLASTP
1607516365291ISSo9 nucleotidyltransferase domain proteinQuickGO ontologyBLASTP
1636216739378ISSod9 conserved hypothetical proteinQuickGO ontologyBLASTP
1673317290558ISSod9 DNA-invertaseQuickGO ontologyBLASTP
1732418154831BLASTP
1818718462276BLASTP
1877419079306plasmid maintenance system toxin protein HigBQuickGO ontologyBLASTP
1915419453300plasmid maintenance system antidote protein HigAQuickGO ontologyBLASTP
1952320332810ISSod1 transposase OrfBQuickGO ontologyBLASTP
2075921067309site-specific recombinase resolvase familyQuickGO ontologyBLASTP
21138222971160ISSod1 transposase OrfAQuickGO ontologyBLASTP
2148822297810ISSod1 transposase OrfBQuickGO ontologyBLASTP
2236822490123hypothetical protein
22779246531875partition protein ParB family putativeQuickGO ontologyBLASTP
2477825233456hypothetical proteinBLASTP
2523525723489hypothetical proteinBLASTP
2575425975222hypothetical protein