Pre_GI Gene

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Host: NC_011751 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011751:643976 Escherichia coli UMN026 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
643976644608633transcriptional regulator FimZQuickGO ontologyBLASTP
64485164492777tRNA-ArgQuickGO ontologyBLASTP
6449436461061164putative integrase DLP12 prophageQuickGO ontologyBLASTP
645962646363402Excisionase from phage originQuickGO ontologyBLASTP
646305646583279hypothetical proteinBLASTP
646631646849219hypothetical proteinBLASTP
646942647259318hypothetical proteinBLASTP
647240647431192hypothetical proteinBLASTP
647583648263681exonuclease from phage originQuickGO ontologyBLASTP
648260649045786recombination protein bet from phage originQuickGO ontologyBLASTP
649051649347297putative host-nuclease inhibitor protein Gam of bacteriophageQuickGO ontologyBLASTP
649423649629207prophage Kil proteinQuickGO ontologyBLASTP
650112651044933hypothetical proteinBLASTP
651041651514474hypothetical proteinBLASTP
651596652351756regulatory protein CI from bacteriophage originQuickGO ontologyBLASTP
652390652620231hypothetical proteinBLASTP
652690653229540regulatory protein CII from bacteriophage originQuickGO ontologyBLASTP
6532266542451020replication protein O frm phage originQuickGO ontologyBLASTP
654242654943702putative replication protein P of bacteriophageQuickGO ontologyBLASTP
654940655242303ren protein from phage originQuickGO ontologyBLASTP
655173655382210hypothetical protein
6554916569931503Chromosome segregation ATPase from phage origin putative coiled-coilQuickGO ontologyBLASTP
657369657542174hypothetical protein
657806658414609hypothetical proteinBLASTP
658650659159510hypothetical proteinBLASTP
659354659809456hypothetical proteinBLASTP
659809659979171prophage protein NinEQuickGO ontologyBLASTP
659972660262291hypothetical proteinBLASTP
660259660621363endodeoxyribonuclease RUSQuickGO ontologyBLASTP
660844661227384putative antitermination protein Q-like protein DLP12 prophageQuickGO ontologyBLASTP
6614176624991083putative outer membrane porinQuickGO ontologyBLASTP
663073663288216putative phage lysis protein S DLP12 prophageQuickGO ontologyBLASTP
663288663785498putative lysozyme DLP12 prophageQuickGO ontologyBLASTP
663770664249480Endopeptidase from phage originQuickGO ontologyBLASTP
664531664695165Arginyl-tRNA synthetaseQuickGO ontology
664741665166426hypothetical proteinBLASTP
665209665442234hypothetical proteinBLASTP
665548665691144hypothetical proteinBLASTP