Pre_GI Gene

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Host: NC_005140 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005140:960261 Vibrio vulnificus YJ016 chromosome II, complete sequence

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
960261960722462hypothetical proteinBLASTP
9607199617651047hypothetical proteinBLASTP
9622179632601044hypothetical proteinBLASTP
963248963376129hypothetical protein
963665963919255hypothetical proteinBLASTP
964081964725645hypothetical proteinBLASTP
965081965269189hypothetical protein
965309965830522hypothetical protein
965796966323528predicted transcriptional regulatorQuickGO ontologyBLASTP
966338966979642hypothetical proteinBLASTP
966970967260291hypothetical protein
967272967490219hypothetical protein
967487968422936hypothetical protein
968422968592171hypothetical protein
968665968784120hypothetical protein
968738969220483hypothetical protein
969265970263999nucleoid-associated protein NdpAQuickGO ontologyBLASTP
970359970844486hypothetical protein
971058971396339hypothetical protein
971396971578183hypothetical protein
972152972310159hypothetical protein
972320972895576predicted phosphohydrolaseQuickGO ontologyBLASTP
972876973181306hypothetical proteinBLASTP
973222973560339hypothetical proteinBLASTP
973547974005459hypothetical protein
9742389755061269phage integraseQuickGO ontologyBLASTP
975678975839162cobyric acid synthaseQuickGO ontologyBLASTP
975688975885198hypothetical protein
975994976362369hypothetical proteinBLASTP
976507977043537hypothetical proteinBLASTP
977166977783618hypothetical proteinBLASTP
9777979789931197aspartate aminotransferaseQuickGO ontologyBLASTP
9791959815072313methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP