Pre_GI Gene

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Host: NC_012667 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012667:703852 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7038527070073156chitodextrinase precursorQuickGO ontologyBLASTP
7072737084961224glucose-1-phosphate adenylyltransferaseQuickGO ontologyBLASTP
7087997107271929sensory boxGGDEF family proteinQuickGO ontologyBLASTP
7123887140761689hypothetical proteinBLASTP
7140867161972112hypothetical proteinBLASTP
7170717188251755hypothetical proteinBLASTP
7188287201381311hypothetical proteinBLASTP
7201527212191068patatin-related proteinQuickGO ontologyBLASTP
722799723107309hypothetical proteinBLASTP
7236167252141599deoxycytidylate deaminase-related proteinQuickGO ontologyBLASTP
725368726024657SH3 domain proteinQuickGO ontologyBLASTP
726101726556456hypothetical protein
7266287284661839preprotein translocase subunit SecDQuickGO ontologyBLASTP
728470729372903protein-export membrane protein SecFQuickGO ontologyBLASTP
730043730783741acetoacetyl-CoA reductaseQuickGO ontologyBLASTP
7307967320011206acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
732031732378348hypothetical proteinBLASTP
7324367342111776polyhydroxyalkanoic acid synthaseQuickGO ontologyBLASTP
7342977353521056ferric transporter ATP-binding subunitQuickGO ontologyBLASTP