Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:2426686 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
242668624280411356conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
24282212428574354hypothetical proteinBLASTP
24286922429507816predicted ORFQuickGO ontologyBLASTP
24295372430070534predicted ORFQuickGO ontologyBLASTP
243008324322752193bacteriocin ABC transporter ATPase and permease component PlnGQuickGO ontologyBLASTP
24332582434148891predicted ORFQuickGO ontologyBLASTP
24341412434917777Response regulator of the LytRAlgR familyQuickGO ontologyBLASTP
24350372435297261predicted ORFQuickGO ontology
24367652437064300immunity protein homologous to piscicolin SakXIM ubericin SakacinP enterocin mundticinQuickGO ontologyBLASTP
24372432437401159hypothetical proteinBLASTP
24378702438055186hypothetical proteinBLASTP
24381152438300186predicted ORFQuickGO ontologyBLASTP
24386862438871186predicted ORFQuickGO ontologyBLASTP
24389212439727807immunity protein PlnI membrane-bound protease CAAX familyQuickGO ontologyBLASTP
24398052439987183predicted ORFQuickGO ontologyBLASTP
24400482440488441predicted ORFQuickGO ontologyBLASTP
244054324419701428permease of the major facilitator superfamilyQuickGO ontologyBLASTP
24421432442475333hypothetical proteinBLASTP
24427662443107342PrebacteriocinQuickGO ontologyBLASTP
24432782444231954oxidoreductase aldoketo reductase family proteinQuickGO ontologyBLASTP
24442032444448246predicted ORFQuickGO ontologyBLASTP
24446912445425735oxidoreductase short-chain dehydrogenasereductase family proteinQuickGO ontologyBLASTP
244545524466001146NADHflavin oxidoreductase yqiG Old Yellow Enzyme familyQuickGO ontologyBLASTP