Pre_GI Gene

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Host: CU928145 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

CU928145:2973968 Escherichia coli 55989 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29739682974846879NAD kinaseQuickGO ontologyBLASTP
297493229765931662recombination and repair proteinQuickGO ontologyBLASTP
29767422977083342small membrane lipoproteinQuickGO ontologyBLASTP
29771452977435291conserved hypothetical proteinBLASTP
29774252977901477conserved hypothetical proteinBLASTP
29780332978515483trans-translation proteinQuickGO ontologyBLASTP
29787232979171449TmRNAQuickGO ontologyBLASTP
297929829805391242integrase CP4-57 prophageQuickGO ontologyBLASTP
298067829844243747conserved hypothetical proteinBLASTP
298489229887433852conserved hypothetical proteinBLASTP
29887892989535747hypothetical proteinBLASTP
29893872989701315hypothetical proteinBLASTP
29897862989944159hypothetical proteinBLASTP
29899692990850882hypothetical proteinBLASTP
29913692991668300putative GTP-binding factor fragment from putative CP4-like prophageQuickGO ontologyBLASTP
29916892992036348transposase ORF A IS3 familyQuickGO ontologyBLASTP
29921562992902747fragment of transposase ORF B IS3 family partialQuickGO ontologyBLASTP
29928722993471600putative outer membrane proteinQuickGO ontologyBLASTP
29936812993869189fragment of putative invertase fragment fragment partialQuickGO ontologyBLASTP
29942542994943690fragment of conserved hypothetical protein from bacteriophage origin part 2QuickGO ontologyBLASTP
29951442995626483fragment of conserved hypothetical protein from bacteriophage origin part 1QuickGO ontologyBLASTP
29961412996470330conserved hypothetical proteinBLASTP
2996377299645276tRNA-MetQuickGO ontologyBLASTP
299701229986581647fragment of putative Alpha-amylase part 1QuickGO ontologyBLASTP
29987322998854123fragment of putative Alpha-amylase part 2QuickGO ontologyBLASTP
29989932999265273conserved hypothetical proteinBLASTP