Pre_GI Gene

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Host: NC_012583 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012583:861225 Vibrio cholerae O395 chromosome chromosome II, complete sequence

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8612258626461422transcriptional regulator GntR familyQuickGO ontologyBLASTP
8627758643671593cytochrome d ubiquinol oxidase subunit IQuickGO ontologyBLASTP
8643808655161137cytochrome d ubiquinol oxidase subunit IIQuickGO ontologyBLASTP
866338866541204hypothetical proteinBLASTP
8667588680831326D-serine dehydrataseQuickGO ontologyBLASTP
868291869235945D-serine deaminase activatorQuickGO ontologyBLASTP
8695358706111077putative hydrolaseQuickGO ontologyBLASTP
870719870880162integrase-related proteinQuickGO ontologyBLASTP
871409871564156hypothetical proteinBLASTP
871509871889381hypothetical proteinBLASTP
871914872309396hypothetical proteinBLASTP
8723218733851065hypothetical proteinBLASTP
8733988745071110hypothetical proteinBLASTP
8745588756191062hypothetical proteinBLASTP
875754875927174hypothetical proteinBLASTP
8767168777471032threonine 3-dehydrogenaseQuickGO ontologyBLASTP
87775087894311942-amino-3-ketobutyrate coenzyme A ligaseQuickGO ontologyBLASTP
879263880123861intracellular proteaseamidaseQuickGO ontologyBLASTP
880101880862762transcriptional regulator LuxR familyQuickGO ontologyBLASTP
880962881900939transcriptional regulator LysR familyQuickGO ontologyBLASTP
881894882277384glyoxylase I family proteinQuickGO ontologyBLASTP
8823558837671413hypothetical proteinBLASTP