Pre_GI Gene

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Host: NC_016446 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016446:979884 Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9798849813561473hypothetical proteinBLASTP
981345982340996D-lactate dehydrogenaseQuickGO ontologyBLASTP
9825239838661344hypothetical proteinBLASTP
983868984710843hypothetical proteinBLASTP
984776985324549hypothetical proteinBLASTP
985440985817378hypothetical proteinBLASTP
9859829870251044guanosine 5-monophosphate oxidoreductaseQuickGO ontologyBLASTP
9873499885001152DNA cytosine-5--methyltransferaseQuickGO ontologyBLASTP
9886609905401881hypothetical proteinBLASTP
9905339916571125hypothetical proteinBLASTP
991654992532879hypothetical proteinBLASTP
992600993037438IS1004 transposaseQuickGO ontologyBLASTP
9935429948971356ATP-dependent RNA helicase RhlEQuickGO ontologyBLASTP
9950879964151329anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
996526996657132hypothetical proteinBLASTP
996666997496831NAD synthetaseQuickGO ontologyBLASTP
997599998126528nicotinate-nucleotide adenylyltransferaseQuickGO ontologyBLASTP
9983939999341542response regulatorQuickGO ontologyBLASTP
99999210019381947sensory box sensor histidine kinaseQuickGO ontologyBLASTP
10021881003162975ABC-type sugar transport system ATPase componentQuickGO ontologyBLASTP
100324010048201581hypothetical proteinBLASTP