Pre_GI Gene

Some Help

Host: NC_013198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013198:2458080 Lactobacillus rhamnosus GG, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
245808024594351356conserved hypothetical protein integral membrane protein by homologyQuickGO ontologyBLASTP
24596122459965354hypothetical proteinBLASTP
246008324614621380lactococcin A ABC transporter permease proteinQuickGO ontologyBLASTP
246147524636672193bacteriocin ABC-transporter ATPase and permease component PlnGQuickGO ontologyBLASTP
246422624655391314sensor histidine kinase PrcKQuickGO ontologyBLASTP
24655322466320789response regulator LytRAlgR familyQuickGO ontologyBLASTP
24686642468909246predicted ORFQuickGO ontology
24691592469458300immunity protein homologous to piscicolin SakXIM ubericin SakacinP enterocin mundticinQuickGO ontologyBLASTP
24696352469793159hypothetical proteinBLASTP
24702622470447186hypothetical proteinBLASTP
24705072470692186predicted ORFQuickGO ontologyBLASTP
24710792471264186predicted ORFQuickGO ontologyBLASTP
24713142472120807immunity protein PlnI membrane-bound protease CAAX familyQuickGO ontologyBLASTP
24721982472380183predicted ORFQuickGO ontologyBLASTP
24724412472881441transcriptional regulator BadMRrf2 familyQuickGO ontologyBLASTP
247293624743631428permease of the major facilitator superfamilyQuickGO ontologyBLASTP
24745372474869333hypothetical proteinBLASTP
24751602475501342prebacteriocinQuickGO ontologyBLASTP
24756762476629954oxidoreductase aldoketo reductase family proteinQuickGO ontologyBLASTP
24768132476995183predicted ORFQuickGO ontology
24771002477834735oxidoreductase short-chain dehydrogenasereductase family proteinQuickGO ontologyBLASTP
247786424790091146NADHflavin oxidoreductase NADH-dependent Old Yellow Enzyme familyQuickGO ontologyBLASTP