Pre_GI: OUP MCL Sub Cluster Neighbours

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Query: NC_016894:1092005 Acetobacterium woodii DSM 1030 chromosome, complete genome

D: 24.1184

Host Lineage: Acetobacterium woodii; Acetobacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Acetobacterium woodii is a Gram positive, motile, strict anaerobic, acetogenic bacterium, that relies on Na+ as coupling ion in bioenergetic reactions. The organism can use a wide range of substrates, such as sugars, alcohols, methoxylated aromatic acids or C1 compounds. Electrons derived from these electron donors are used in the Wood-Ljungdahl-pathway where the organism fixes CO2 and produces acetate. The pathway of CO2-fixation is coupled to energy conservation via a chemiosmotic mechanism, one enzyme that seems to be involved is the Rnf complex. The produced Na+ gradient can be used to drive ATP-synthesis or flagella rotation. The ATP synthase is a member of the F1FO class of enzymes and has an unusual hybrid rotor. Can use alternative electron acceptors like the lignin degradation product caffeate.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host DescriptionProposed Island FlowSubject Island D
NC_016894:2931213*Acetobacterium woodii DSM 1030 chromosome, complete genomeSubject ←→ Query22.8052
NC_006300:60484Mannheimia succiniciproducens MBEL55E, complete genomeSubject ←→ Query23.9978
NC_016894:1092005*Acetobacterium woodii DSM 1030 chromosome, complete genomeSubject ←→ Query24.1184
NC_016609:8772011Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query24.7922
NC_016609:4209000Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query25.0608
NC_016609:2150863*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query25.1989
NC_015177:1859879Pedobacter saltans DSM 12145 chromosome, complete genomeSubject ←→ Query25.8537
NC_013416:1091432*Aggregatibacter actinomycetemcomitans D11S-1, complete genomeSubject ←→ Query25.994
NC_012913:56258*Aggregatibacter aphrophilus NJ8700, complete genomeSubject ←→ Query26.297
NC_020134:586840Clostridium stercorarium subsp. stercorarium DSM 8532, completeSubject ←→ Query26.3771
NC_020134:343402Clostridium stercorarium subsp. stercorarium DSM 8532, completeSubject ←→ Query26.3801
NC_016609:5763357Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query26.6291
NC_020134:301500*Clostridium stercorarium subsp. stercorarium DSM 8532, completeSubject ←→ Query26.7931
NC_016894:3114394Acetobacterium woodii DSM 1030 chromosome, complete genomeSubject ←→ Query26.8405
NC_011035:1033942*Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeSubject ←→ Query26.9638
NC_016609:2224212*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query27.1032
UCMB5137:1834999Bacillus atrophaeus UCMB-5137Subject ←→ Query27.1036
NC_016609:8251438*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query27.1918
NC_017511:950411*Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeSubject ←→ Query27.5985
NC_020134:1173000*Clostridium stercorarium subsp. stercorarium DSM 8532, completeSubject ←→ Query27.7639
NC_015634:1377376Bacillus coagulans 2-6 chromosome, complete genomeSubject ←→ Query27.8423
NC_013416:386301*Aggregatibacter actinomycetemcomitans D11S-1, complete genomeSubject ←→ Query28.019
NC_016023:1658377Bacillus coagulans 36D1 chromosome, complete genomeSubject ←→ Query28.1001
NC_016023:755237Bacillus coagulans 36D1 chromosome, complete genomeSubject ←→ Query28.1884
NC_013416:820989*Aggregatibacter actinomycetemcomitans D11S-1, complete genomeSubject ←→ Query28.2199
NC_013016:1289975*Neisseria meningitidis alpha14 chromosome, complete genomeSubject ←→ Query28.4077
NC_015634:526889Bacillus coagulans 2-6 chromosome, complete genomeSubject ←→ Query28.4553
NC_016609:4152977*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query28.4655
NC_016023:3391116Bacillus coagulans 36D1 chromosome, complete genomeSubject ←→ Query28.5263
NC_017512:789600*Neisseria meningitidis WUE 2594, complete genomeSubject ←→ Query28.5992
NC_016894:3935161Acetobacterium woodii DSM 1030 chromosome, complete genomeSubject ←→ Query28.6114
NC_017511:884083Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeSubject ←→ Query29.0289
NC_015510:6653159Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSubject ←→ Query29.2769
NC_015510:2209663Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSubject ←→ Query29.3957
NC_017517:898771*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject ←→ Query29.4321
NC_017512:760000Neisseria meningitidis WUE 2594, complete genomeSubject ←→ Query29.4808
NC_017505:1370128Neisseria meningitidis alpha710 chromosome, complete genomeSubject ←→ Query29.724
NC_017512:1294970*Neisseria meningitidis WUE 2594, complete genomeSubject ←→ Query29.8979
NC_011035:1348659Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeSubject ←→ Query29.9368
NC_016609:4331359*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query30.0008
NC_011035:968569Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeSubject ←→ Query30.034
NC_016609:4997414*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query30.0455
NC_017512:526892Neisseria meningitidis WUE 2594, complete genomeSubject ←→ Query30.1617
NC_009725:3763922Bacillus amyloliquefaciens FZB42, complete genomeSubject ←→ Query30.1654
NC_013016:1257942*Neisseria meningitidis alpha14 chromosome, complete genomeSubject ←→ Query30.18
NC_016023:1419217*Bacillus coagulans 36D1 chromosome, complete genomeSubject ←→ Query30.2076
NC_017516:1755500Neisseria meningitidis H44/76 chromosome, complete genomeSubject ←→ Query30.2286
NC_002946:684728Neisseria gonorrhoeae FA 1090, complete genomeSubject ←→ Query30.2475
NC_017515:1744500Neisseria meningitidis M04-240196 chromosome, complete genomeSubject ←→ Query30.2985
NC_003116:1734000Neisseria meningitidis Z2491, complete genomeSubject ←→ Query30.3786
NC_015460:418826Gallibacterium anatis UMN179 chromosome, complete genomeSubject ←→ Query30.4505
NC_017518:1558000*Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject ←→ Query30.4596
NC_017514:1640355*Neisseria meningitidis M01-240149 chromosome, complete genomeSubject ←→ Query30.5143
NC_017517:1807072Neisseria meningitidis M01-240355 chromosome, complete genomeSubject ←→ Query30.5508
NC_016609:7565483Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query30.5573
NC_017518:2041282Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject ←→ Query30.6982
NC_017501:1829500*Neisseria meningitidis 8013, complete genomeSubject ←→ Query30.9217
NC_017516:2183708*Neisseria meningitidis H44/76 chromosome, complete genomeSubject ←→ Query30.9808
NC_017516:1535904*Neisseria meningitidis H44/76 chromosome, complete genomeSubject ←→ Query31.1284
NC_017517:1915842*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject ←→ Query31.2581
NC_017515:76861*Neisseria meningitidis M04-240196 chromosome, complete genomeSubject ←→ Query31.2678
NC_017513:9081*Neisseria meningitidis G2136 chromosome, complete genomeSubject ←→ Query31.3088
NC_010120:1313500Neisseria meningitidis 053442, complete genomeSubject ←→ Query31.5054
NC_017514:1721416Neisseria meningitidis M01-240149 chromosome, complete genomeSubject ←→ Query31.534
NC_015703:1992000*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query31.5564
NC_015703:3801168Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query31.6011
NC_017505:1338661*Neisseria meningitidis alpha710 chromosome, complete genomeSubject ←→ Query31.7121
NC_010120:452771Neisseria meningitidis 053442, complete genomeSubject ←→ Query31.7374
NC_003116:658879Neisseria meningitidis Z2491, complete genomeSubject ←→ Query31.8631
NC_017501:1913360*Neisseria meningitidis 8013, complete genomeSubject ←→ Query32.0878
NC_017513:1331623Neisseria meningitidis G2136 chromosome, complete genomeSubject ←→ Query32.1316
NC_016609:3576490Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query32.1473
NC_017514:1491235*Neisseria meningitidis M01-240149 chromosome, complete genomeSubject ←→ Query32.1478
NC_017505:841496Neisseria meningitidis alpha710 chromosome, complete genomeSubject ←→ Query32.1559
NC_017501:1493292*Neisseria meningitidis 8013, complete genomeSubject ←→ Query32.1733
NC_017501:1680075*Neisseria meningitidis 8013, complete genomeSubject ←→ Query32.1832
NC_017515:1429317Neisseria meningitidis M04-240196 chromosome, complete genomeSubject ←→ Query32.1984
NC_015703:6295500*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query32.2066
NC_017515:875500Neisseria meningitidis M04-240196 chromosome, complete genomeSubject ←→ Query32.2995
NC_015703:4655488*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query32.3083
NC_014752:1391615Neisseria lactamica ST-640, complete genomeSubject ←→ Query32.3222
NC_015703:2281479Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query32.3604
NC_010120:144000*Neisseria meningitidis 053442, complete genomeSubject ←→ Query32.4921
NC_015703:4933430*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query32.5197
NC_017518:1701958Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject ←→ Query32.5554
NC_013416:668152*Aggregatibacter actinomycetemcomitans D11S-1, complete genomeSubject ←→ Query32.5727
NC_015703:4483500*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query32.5814
NC_003112:1594000Neisseria meningitidis MC58, complete genomeSubject ←→ Query32.6666
NC_017514:863485Neisseria meningitidis M01-240149 chromosome, complete genomeSubject ←→ Query32.8417
NC_017517:1409000Neisseria meningitidis M01-240355 chromosome, complete genomeSubject ←→ Query32.8419
NC_017514:1396000Neisseria meningitidis M01-240149 chromosome, complete genomeSubject ←→ Query32.9183
NC_017511:1883663*Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeSubject ←→ Query32.9463
NC_017518:1843705Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject ←→ Query32.9852
NC_017517:1377617*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject ←→ Query33.0262
NC_010120:609323*Neisseria meningitidis 053442, complete genomeSubject ←→ Query33.1254
NC_017515:1855114Neisseria meningitidis M04-240196 chromosome, complete genomeSubject ←→ Query33.201
NC_008767:451983Neisseria meningitidis FAM18, complete genomeSubject ←→ Query33.2143
NC_015510:1012195Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSubject ←→ Query33.2314
NC_013016:1441424*Neisseria meningitidis alpha14 chromosome, complete genomeSubject ←→ Query33.3818
NC_017513:618500*Neisseria meningitidis G2136 chromosome, complete genomeSubject ←→ Query33.4105
NC_015634:2991669Bacillus coagulans 2-6 chromosome, complete genomeSubject ←→ Query33.4266
NC_017517:867595Neisseria meningitidis M01-240355 chromosome, complete genomeSubject ←→ Query33.4316
NC_016609:1774259*Niastella koreensis GR20-10 chromosome, complete genomeSubject ←→ Query33.4392
NC_017515:2194500*Neisseria meningitidis M04-240196 chromosome, complete genomeSubject ←→ Query33.457
NC_008767:1739344Neisseria meningitidis FAM18, complete genomeSubject ←→ Query33.4813
NC_017516:917817*Neisseria meningitidis H44/76 chromosome, complete genomeSubject ←→ Query33.5306
NC_017512:2161000*Neisseria meningitidis WUE 2594, complete genomeSubject ←→ Query33.5752
NC_014734:3086165*Paludibacter propionicigenes WB4 chromosome, complete genomeSubject ←→ Query33.5874
NC_015703:3842144*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query33.6278
NC_017518:98639*Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject ←→ Query33.6292
NC_017512:1824966*Neisseria meningitidis WUE 2594, complete genomeSubject ←→ Query33.7753
NC_017516:1408000*Neisseria meningitidis H44/76 chromosome, complete genomeSubject ←→ Query33.7865
NC_015703:3880903*Runella slithyformis DSM 19594 chromosome, complete genomeSubject ←→ Query33.9158
NC_013016:1801000*Neisseria meningitidis alpha14 chromosome, complete genomeSubject ←→ Query33.9569
NC_017501:2219803*Neisseria meningitidis 8013, complete genomeSubject ←→ Query34.0133
NC_017516:96879*Neisseria meningitidis H44/76 chromosome, complete genomeSubject Query34.1577
NC_008767:613394*Neisseria meningitidis FAM18, complete genomeSubject Query34.1821
NC_008767:1829500*Neisseria meningitidis FAM18, complete genomeSubject Query34.2169
NC_008767:1321129*Neisseria meningitidis FAM18, complete genomeSubject Query34.4104
NC_017511:543583Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeSubject Query34.5502
NC_003112:498465*Neisseria meningitidis MC58, complete genomeSubject Query34.5628
NC_011035:1564821*Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeSubject Query34.5932
NC_017518:1449923Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject Query34.679
NC_014734:400426Paludibacter propionicigenes WB4 chromosome, complete genomeSubject Query34.6932
NC_017511:1257663Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeSubject Query34.6952
NC_017513:887344Neisseria meningitidis G2136 chromosome, complete genomeSubject Query34.9722
NC_017515:1402218*Neisseria meningitidis M04-240196 chromosome, complete genomeSubject Query35.0499
NC_017514:2165166*Neisseria meningitidis M01-240149 chromosome, complete genomeSubject Query35.1228
NC_017505:751836*Neisseria meningitidis alpha710 chromosome, complete genomeSubject Query35.1233
NC_017501:543000Neisseria meningitidis 8013, complete genomeSubject Query35.1307
NC_017505:96293*Neisseria meningitidis alpha710 chromosome, complete genomeSubject Query35.1854
NC_015703:2104058*Runella slithyformis DSM 19594 chromosome, complete genomeSubject Query35.1991
NC_015693:53196*Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequenceSubject Query35.3465
NC_014752:933000Neisseria lactamica ST-640, complete genomeSubject Query35.3613
NC_011035:1974489*Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeSubject Query35.366
NC_015277:4358000Sphingobacterium sp. 21 chromosome, complete genomeSubject Query35.5666
NC_017514:1885154Neisseria meningitidis M01-240149 chromosome, complete genomeSubject Query35.5785
NC_017501:1863417Neisseria meningitidis 8013, complete genomeSubject Query35.5996
NC_017190:871352Bacillus amyloliquefaciens LL3 chromosome, complete genomeSubject Query35.6367
NC_017511:1467090*Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeSubject Query35.695
NC_016610:2489415*Tannerella forsythia ATCC 43037 chromosome, complete genomeSubject Query35.7292
NC_015703:5272193*Runella slithyformis DSM 19594 chromosome, complete genomeSubject Query35.7512
NC_014752:1063506Neisseria lactamica ST-640, complete genomeSubject Query35.8436
NC_014624:1768226Eubacterium limosum KIST612 chromosome, complete genomeSubject Query35.9105
NC_017517:98554*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject Query35.9863
NC_015703:1087809Runella slithyformis DSM 19594 chromosome, complete genomeSubject Query35.9911
NC_017512:1264542*Neisseria meningitidis WUE 2594, complete genomeSubject Query36.0626
NC_017518:2190607*Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject Query36.3205
NC_017501:96211*Neisseria meningitidis 8013, complete genomeSubject Query36.3312
NC_017512:425085Neisseria meningitidis WUE 2594, complete genomeSubject Query36.4527
NC_011035:566980*Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeSubject Query36.5145
NC_015694:48344Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceSubject Query36.5789
NC_017501:980848Neisseria meningitidis 8013, complete genomeSubject Query36.6598
NC_017514:761000Neisseria meningitidis M01-240149 chromosome, complete genomeSubject Query36.6932
NC_015500:2329957*Treponema brennaborense DSM 12168 chromosome, complete genomeSubject Query36.8007
NC_003112:1824196Neisseria meningitidis MC58, complete genomeSubject Query37.2375
NC_014752:834616Neisseria lactamica ST-640, complete genomeSubject Query37.2753
NC_017516:879834Neisseria meningitidis H44/76 chromosome, complete genomeSubject Query37.2994
NC_017518:828662*Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject Query37.3559
NC_017190:852171Bacillus amyloliquefaciens LL3 chromosome, complete genomeSubject Query37.3966
NC_016641:2894899Paenibacillus terrae HPL-003 chromosome, complete genomeSubject Query37.4094
NC_017515:1527461*Neisseria meningitidis M04-240196 chromosome, complete genomeSubject Query37.6876
NC_017515:800000*Neisseria meningitidis M04-240196 chromosome, complete genomeSubject Query38.0958
NC_017514:446616Neisseria meningitidis M01-240149 chromosome, complete genomeSubject Query38.6495
NC_013016:44188*Neisseria meningitidis alpha14 chromosome, complete genomeSubject Query38.6977
NC_017514:96911*Neisseria meningitidis M01-240149 chromosome, complete genomeSubject Query38.7318
NC_017517:2228000*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject Query38.8558
NC_017518:1610803*Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject Query38.8619
NC_013016:419604Neisseria meningitidis alpha14 chromosome, complete genomeSubject Query39.1212
NC_017512:52228*Neisseria meningitidis WUE 2594, complete genomeSubject Query39.2177
NC_017517:153379*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject Query39.231
NC_003116:291661*Neisseria meningitidis Z2491, complete genomeSubject Query39.4107
NC_017188:2221705Bacillus amyloliquefaciens TA208 chromosome, complete genomeSubject Query39.9662
NC_017505:1783476Neisseria meningitidis alpha710 chromosome, complete genomeSubject Query40.0295
NC_013216:426877Desulfotomaculum acetoxidans DSM 771, complete genomeSubject Query40.1359
NC_014752:197000*Neisseria lactamica ST-640, complete genomeSubject Query40.1397
NC_017513:1845069*Neisseria meningitidis G2136 chromosome, complete genomeSubject Query40.2703
NC_003112:2215184*Neisseria meningitidis MC58, complete genomeSubject Query40.7794
NC_017191:2223740Bacillus amyloliquefaciens XH7 chromosome, complete genomeSubject Query41.0813
NC_017516:1439775Neisseria meningitidis H44/76 chromosome, complete genomeSubject Query41.2895
NC_017513:449949Neisseria meningitidis G2136 chromosome, complete genomeSubject Query41.3161
NC_010120:1065833Neisseria meningitidis 053442, complete genomeSubject Query41.3655
NC_017516:364404Neisseria meningitidis H44/76 chromosome, complete genomeSubject Query41.6596
NC_003112:1423528Neisseria meningitidis MC58, complete genomeSubject Query41.9899
NC_017515:372487Neisseria meningitidis M04-240196 chromosome, complete genomeSubject Query42.0531
NC_017517:527687*Neisseria meningitidis M01-240355 chromosome, complete genomeSubject Query42.1861
NC_017518:577159Neisseria meningitidis NZ-05/33 chromosome, complete genomeSubject Query42.5344
NC_017505:497603*Neisseria meningitidis alpha710 chromosome, complete genomeSubject Query42.6547
NC_015500:484984Treponema brennaborense DSM 12168 chromosome, complete genomeSubject Query43.8636
NC_014828:637523Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSubject Query49.7096