Pre_GI Gene

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Host: NC_016894 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016894:3935161 Acetobacterium woodii DSM 1030 chromosome, complete genome

Host Lineage: Acetobacterium woodii; Acetobacterium; Eubacteriaceae; Clostridiales; Firmicutes; Bacteria

General Information: Acetobacterium woodii is a Gram positive, motile, strict anaerobic, acetogenic bacterium, that relies on Na+ as coupling ion in bioenergetic reactions. The organism can use a wide range of substrates, such as sugars, alcohols, methoxylated aromatic acids or C1 compounds. Electrons derived from these electron donors are used in the Wood-Ljungdahl-pathway where the organism fixes CO2 and produces acetate. The pathway of CO2-fixation is coupled to energy conservation via a chemiosmotic mechanism, one enzyme that seems to be involved is the Rnf complex. The produced Na+ gradient can be used to drive ATP-synthesis or flagella rotation. The ATP synthase is a member of the F1FO class of enzymes and has an unusual hybrid rotor. Can use alternative electron acceptors like the lignin degradation product caffeate.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
393516139362191059MerR family transcriptional regulatorQuickGO ontologyBLASTP
39364353936581147hypothetical protein
39371593937971813putative 4Fe-4S ferredoxin iron-sulpur binding domain proteinQuickGO ontologyBLASTP
39382933938850558transcriptional regulator TetR familyQuickGO ontologyBLASTP
393901839409911974flavin oxidoreductase NADHQuickGO ontologyBLASTP
39413653941901537transposaseQuickGO ontologyBLASTP
394204839433071260transposase IS1604QuickGO ontologyBLASTP
39433003944100801AAA ATPaseQuickGO ontologyBLASTP
39443333944629297hypothetical protein
394499239463501359sensor histidine kinaseQuickGO ontologyBLASTP
39463553947017663response regulatorQuickGO ontologyBLASTP
39484953948842348hypothetical proteinBLASTP
39488583949622765hypothetical proteinBLASTP
39496293949925297hypothetical protein
39503433950921579NADPH-dependent FMN reductase FrbQuickGO ontologyBLASTP
39510313951900870AraC family transcriptional regulatorQuickGO ontologyBLASTP
395204239535081467Na driven multidrug efflux pumpQuickGO ontologyBLASTP
39536893954348660hypothetical protein
39544643955075612transcriptional regulator TetR familyQuickGO ontologyBLASTP
39553213955860540NADPH-dependent FMN reductaseQuickGO ontologyBLASTP
39560383956364327hypothetical proteinBLASTP
39564323956944513transposase Tnp3QuickGO ontologyBLASTP
395784539601062262excinuclease ATPase subunit UvrA2QuickGO ontologyBLASTP