Pre_GI Gene

Some Help

Host: NC_020134 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_020134:586840 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
586840587220381diacylglycerol kinaseQuickGO ontologyBLASTP
587235587900666putative zinc metalloproteaseQuickGO ontologyBLASTP
587910588677768segregation and condensation protein AQuickGO ontologyBLASTP
588686589237552segregation and condensation protein BQuickGO ontologyBLASTP
589452589994543hypothetical protein
590052590501450sporulation protein YtfJQuickGO ontologyBLASTP
590622590834213small acid-soluble spore protein alphabeta typeQuickGO ontologyBLASTP
591118591498381flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
591505591954450flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
591992592291300flagellar hook-basal body complex protein FliEQuickGO ontologyBLASTP
5923525939291578flagellar M-ring protein FliFQuickGO ontologyBLASTP
5939445949661023flagellar motor switch protein FliGQuickGO ontologyBLASTP
594959595717759flagellar assembly protein FliHQuickGO ontologyBLASTP
5956925970831392flagellum-specific ATP synthase FliIQuickGO ontologyBLASTP
597083597538456flagellar export protein FliJQuickGO ontology
597549598370822hypothetical proteinBLASTP
5984065998361431flagellar hook-length control protein FliKQuickGO ontologyBLASTP
5998546008671014flagellar hook capping protein FlgDQuickGO ontologyBLASTP
600864601244381flagellar operon proteinQuickGO ontologyBLASTP
6013806027831404flagellar hook protein FlgEQuickGO ontologyBLASTP
602818603096279flagellar FlbD family proteinQuickGO ontologyBLASTP
603119603637519flagellar basal body-associated protein FliLQuickGO ontology
603671604660990flagellar motor switch protein FliMQuickGO ontologyBLASTP