Pre_GI: BLASTN Hits

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Query: NC_008800:1300500 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 1300500, End: 1327486, Length: 26987

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015224:3225000*3225000325159926600Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02694BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02644BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02619BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02603BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02597BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02593BLASTN svgBLASTP svg
NC_015224:17638481763848179825034403Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02589BLASTN svgBLASTP svg
NC_015224:14402831440283145849618214Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02587BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02587BLASTN svgBLASTP svg
NC_015224:10673901067390110671739328Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02565BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02545BLASTN svgBLASTP svg
NC_010634:31557413155741318046024720Yersinia pseudotuberculosis PB1/+, complete genome01473BLASTN svgBLASTP svg
NC_006155:32379903237990326294924960Yersinia pseudotuberculosis IP 32953, complete genome01449BLASTN svgBLASTP svg
NC_012880:37486653748665378917040506Dickeya dadantii Ech703, complete genome2e-87331BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_005126:32049803204980322748422505Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-50208BLASTN svgBLASTP svg
NC_010468:13432281343228136315119924Escherichia coli ATCC 8739, complete genome4e-30141BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome1e-27133BLASTN svgBLASTP svg
NC_004741:25264212526421254776721347Shigella flexneri 2a str. 2457T, complete genome1e-27133BLASTN svgBLASTP svg
NC_004337:25482882548288256963421347Shigella flexneri 2a str. 301, complete genome1e-27133BLASTN svgBLASTP svg
NC_006155:33333033333303335118117879Yersinia pseudotuberculosis IP 32953, complete genome4e-27131BLASTN svgBLASTP svg
NC_005810:33330003333000336198528986Yersinia pestis biovar Microtus str. 91001, complete genome4e-27131BLASTN svgBLASTP svg
NC_005810:3021913*3021913304567123759Yersinia pestis biovar Microtus str. 91001, complete genome4e-27131BLASTN svgBLASTP svg
NC_004088:38591733859173388653627364Yersinia pestis KIM, complete genome4e-27131BLASTN svgBLASTP svg
NC_004088:15104671510467153309222626Yersinia pestis KIM, complete genome4e-27131BLASTN svgBLASTP svg
NC_003143:74116974116977078329615Yersinia pestis CO92, complete genome4e-27131BLASTN svgBLASTP svg
NC_003143:31912463191246321275521510Yersinia pestis CO92, complete genome4e-27131BLASTN svgBLASTP svg
NC_008149:14403711440371146301222642Yersinia pestis Nepal516, complete genome4e-27131BLASTN svgBLASTP svg
NC_008149:65070665070667964628941Yersinia pestis Nepal516, complete genome4e-27131BLASTN svgBLASTP svg
NC_010634:32508103250810326864117832Yersinia pseudotuberculosis PB1/+, complete genome4e-27131BLASTN svgBLASTP svg
NC_010465:73391673391676156927654Yersinia pseudotuberculosis YPIII, complete genome4e-27131BLASTN svgBLASTP svg
NC_010465:14271701427170145224325074Yersinia pseudotuberculosis YPIII, complete genome4e-27131BLASTN svgBLASTP svg
NC_010159:409500*40950045168242183Yersinia pestis Angola, complete genome4e-27131BLASTN svgBLASTP svg
NC_010159:25969525969528600726313Yersinia pestis Angola, complete genome4e-27131BLASTN svgBLASTP svg
NC_008150:34300003430000345505925060Yersinia pestis Antiqua, complete genome4e-27131BLASTN svgBLASTP svg
NC_008150:25747942574794259632821535Yersinia pestis Antiqua, complete genome4e-27131BLASTN svgBLASTP svg
NC_003143:483395*48339550335019956Yersinia pestis CO92, complete genome3e-25125BLASTN svgBLASTP svg
NC_004088:41166764116676413528618611Yersinia pestis KIM, complete genome3e-25125BLASTN svgBLASTP svg
NC_005810:42245004224500424264818149Yersinia pestis biovar Microtus str. 91001, complete genome3e-25125BLASTN svgBLASTP svg
NC_006155:713174*71317473201318840Yersinia pseudotuberculosis IP 32953, complete genome3e-25125BLASTN svgBLASTP svg
NC_008149:402599*40259942390621308Yersinia pestis Nepal516, complete genome3e-25125BLASTN svgBLASTP svg
NC_008150:4561633*4561633458159919967Yersinia pestis Antiqua, complete genome3e-25125BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome3e-25125BLASTN svgBLASTP svg
NC_010465:39587663958766397730818543Yersinia pseudotuberculosis YPIII, complete genome3e-25125BLASTN svgBLASTP svg
NC_015224:27903727903730366824632Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-25125BLASTN svgBLASTP svg
NC_015581:1891409*1891409191922227814Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome9e-19103BLASTN svgBLASTP svg
NC_015224:38203383820338386215341816Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-19103BLASTN svgBLASTP svg
NC_010634:33680003368000339029322294Yersinia pseudotuberculosis PB1/+, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_006155:34564883456488347575719270Yersinia pseudotuberculosis IP 32953, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_020063:3690308*3690308375363663329Enterobacteriaceae bacterium strain FGI 57, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008543:32377332377334709923327Burkholderia cenocepacia HI2424 chromosome 2, complete sequence6e-1487.7BLASTN svgBLASTP svg
NC_009800:26517302651730267629124562Escherichia coli HS, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008344:669498*66949869235322856Nitrosomonas eutropha C91, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008344:23747612374761240364328883Nitrosomonas eutropha C91, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_004741:25930122593012261557622565Shigella flexneri 2a str. 2457T, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-1177.8BLASTN svgBLASTP svg
NC_010634:31291743129174315220423031Yersinia pseudotuberculosis PB1/+, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006155:29795002979500301649636997Yersinia pseudotuberculosis IP 32953, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_006155:30407693040769306409923331Yersinia pseudotuberculosis IP 32953, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010634:28946312894631293584741217Yersinia pseudotuberculosis PB1/+, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010634:29600002960000298209922100Yersinia pseudotuberculosis PB1/+, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_006155:35961203596120363277836659Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:11913071191307123066739361Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005810:87267287267291210839437Yersinia pestis biovar Microtus str. 91001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005810:14677721467772150509937328Yersinia pestis biovar Microtus str. 91001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004088:29663312966331300002833698Yersinia pestis KIM, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004088:11968751196875123427537401Yersinia pestis KIM, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008150:25996612599661262209922439Yersinia pestis Antiqua, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:35098803509880354653836659Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:3269010*3269010329227823269Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:11754041175404121321037807Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010465:89392189392191618522265Yersinia pseudotuberculosis YPIII, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010159:31206423120642314771827077Yersinia pestis Angola, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008149:15565811556581157548818908Yersinia pestis Nepal516, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006155:32127963212796323445221657Yersinia pseudotuberculosis IP 32953, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005810:29053622905362292838523024Yersinia pestis biovar Microtus str. 91001, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004088:16229411622941164556522625Yersinia pestis KIM, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003143:33468343346834337009923266Yersinia pestis CO92, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008150:24518722451872247509923228Yersinia pestis Antiqua, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010159:28784992878499290014121643Yersinia pestis Angola, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010465:15506171550617157325522639Yersinia pseudotuberculosis YPIII, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015224:27019142701914272426222349Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_013722:1816561*1816561186559949039Xanthomonas albilineans, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014729:800892*80089282341022519Halogeometricum borinquense DSM 11551 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003143:28045002804500282209917600Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:28493772849377287209922723Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:18018191801819182425322435Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:1851500*1851500188954638047Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:25496802549680258809938420Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005810:26134562613456263609922644Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006350:3865584*3865584389809932516Burkholderia pseudomallei K96243 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008149:24111612411161243409922939Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:18185001818500183609917600Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:18614651861465188409922635Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:17240001724000174609922100Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004088:12657301265730129020024471Yersinia pestis KIM, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005810:12309761230976125037019395Yersinia pestis biovar Microtus str. 91001, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006155:28938022893802291787224071Yersinia pseudotuberculosis IP 32953, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008149:11956141195614122004824435Yersinia pestis Nepal516, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008150:28226892822689284340720719Yersinia pestis Antiqua, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010634:28108152810815283272221908Yersinia pseudotuberculosis PB1/+, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010552:21310212131021214958218562Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_009439:574437*57443759753523099Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008149:33732293373229340909935871Yersinia pestis Nepal516, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004088:35053833505383354055935177Yersinia pestis KIM, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003143:87536787536791053535169Yersinia pestis CO92, complete genome3e-0661.9BLASTN svgBLASTP svg