Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:323773 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
323773324768996chlorinating enzymeQuickGO ontologyBLASTP
324888325169282hypothetical proteinBLASTP
3252703264301161Extracellular ligand-binding receptorQuickGO ontologyBLASTP
326602327249648transcriptional regulator GntR familyQuickGO ontologyBLASTP
327361328038678hypothetical proteinBLASTP
328043329029987transcriptional regulator LysR familyQuickGO ontologyBLASTP
3291503314502301Malate dehydrogenase oxaloacetate-decarboxylating NADP Phosphate acetyltransferaseQuickGO ontologyBLASTP
3316853359624278hypothetical proteinBLASTP
3366873378861200aminotransferase class I and IIQuickGO ontologyBLASTP
337899338090192hypothetical proteinBLASTP
338185338784600pyridoxamine 5-phosphate oxidase-related FMN-bindingQuickGO ontologyBLASTP
338810339700891transcriptional regulator LysR familyQuickGO ontologyBLASTP
339781340539759short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
3407433420201278Epoxide hydrolase domain proteinQuickGO ontologyBLASTP
3420733434581386transcriptional regulator GntR familyQuickGO ontologyBLASTP
3436213449071287hydroxymethylglutaryl-CoA reductase degradativeQuickGO ontologyBLASTP
344996345493498hypothetical proteinBLASTP
3454933468721380hypothetical proteinBLASTP