Pre_GI: BLASTP Hits

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Query: NC_016832:3100683:3107370 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,

Start: 3107370, End: 3107714, Length: 345

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subspecies enterica serovar Typhi P-stx-12 is a clinical isolate obtained from a Typhoid Carrier in India. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4513900:4541654454165445429131260Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage integrase3e-27120
NC_011149:3187022:319388631938863194086201Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp8e-27119
NC_012917:985617:9985629985629998211260Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein8e-27119
NC_012917:569856:5834835834835847421260Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-26118
NC_013421:3752619:3755687375568737569461260Pectobacterium wasabiae WPP163, complete genomeintegrase family protein3e-26117
NC_012880:3529017:3532001353200135332601260Dickeya dadantii Ech703, complete genomeintegrase family protein2e-26117
NC_012880:3982383:3987035398703539883091275Dickeya dadantii Ech703, complete genomeintegrase family protein6e-26115
NC_012912:4012112:4016665401666540179241260Dickeya zeae Ech1591, complete genomeintegrase family protein1e-25115
NC_010067:4418000:443713844371384437881744Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-1992.4
NC_011147:3075186:308210930821093082249141Salmonella enterica subsp. enterica serovar Paratyphi A str3e-1787.4
NC_003198:3126548:313346031334603133600141Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1787.4
NC_011283:1901229:1912830191283019140981269Klebsiella pneumoniae 342 chromosome, complete genomeintegrase5e-1683.2
NC_009792:4017510:403007840300784030329252Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1580.5
NC_016612:5231065:5252187525218752534551269Klebsiella oxytoca KCTC 1686 chromosome, complete genomeintegrase family protein5e-1476.6
NC_013364:3701895:3705514370551437067731260Escherichia coli O111:H- str. 11128, complete genomeputative integrase6e-1476.3
CU928145:4792703:4806663480666348079251263Escherichia coli 55989 chromosome, complete genomeProphage integrase5e-1476.3
NC_004741:3041294:3044913304491330461751263Shigella flexneri 2a str. 2457T, complete genomeputative P4-type integrase5e-1476.3
NC_011748:4792703:4806663480666348079251263Escherichia coli 55989, complete genomeProphage integrase5e-1476.3
NC_004337:3049118:3052737305273730539991263Shigella flexneri 2a str. 301, complete genomeputative P4-type integrase5e-1476.3
NC_017328:3088907:3092526309252630937881263Shigella flexneri 2002017 chromosome, complete genomeSite-specific recombinase, phage integrase family protein5e-1476.3
NC_013592:2968500:2972189297218929734601272Dickeya dadantii Ech586, complete genomeintegrase family protein8e-1475.9
NC_008253:3122148:3128357312835731296221266Escherichia coli 536, complete genomeputative P4-type integrase7e-1475.9
NC_013716:5201097:5270252527025252715141263Citrobacter rodentium ICC168, complete genomeintegrase8e-1475.5
NC_015061:1251905:1270945127094512721801236Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein9e-1475.5
NC_004431:4955658:4970125497012549713871263Escherichia coli CFT073, complete genomeProphage P4 integrase1e-1375.1
NC_011750:3545466:3545739354573935470041266Escherichia coli IAI39 chromosome, complete genomeProphage integrase1e-1375.1
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)2e-1374.7
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1374.7
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-1374.7
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp2e-1374.7
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-1374.7
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-1374.7
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-1374.7
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1374.7
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp2e-1374.7
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein2e-1374.7
NC_011601:3338888:3338888333888833401531266Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase2e-1374.3
AP010958:3627355:3627355362735536286201266Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase2e-1374.3
AP010958:5090696:5118420511842051196851266Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase2e-1374.3
NC_011745:4862218:4879739487973948810011263Escherichia coli ED1a chromosome, complete genomeProphage integrase2e-1374.3
NC_013353:3627355:3627355362735536286201266Escherichia coli O103:H2 str. 12009, complete genomeintegrase2e-1374.3
NC_013353:5090696:5118420511842051196851266Escherichia coli O103:H2 str. 12009, complete genomeintegrase2e-1374.3
NC_002655:3919545:3919545391954539208101266Escherichia coli O157:H7 EDL933, complete genomeputative pathogenicity island integrase2e-1374.3
NC_002695:3852233:3852233385223338534981266Escherichia coli O157:H7 str. Sakai, complete genomeintegrase2e-1374.3
NC_011353:3956630:3956630395663039578951266Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesite-specific recombinase, phage integrase family protein2e-1374.3
NC_013008:3911356:3911356391135639126211266Escherichia coli O157:H7 str. TW14359 chromosome, complete genomepathogenicity island integrase2e-1374.3
NC_013941:3676146:3676146367614636774111266Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSite-specific recombinase, phage integrase family protein2e-1374.3
NC_004431:2185750:2218378221837822194211044Escherichia coli CFT073, complete genomeProphage P4 integrase2e-1373.9
NC_008253:1938975:1971537197153719725801044Escherichia coli 536, complete genomeP4-like integrase2e-1373.9
NC_007384:3383983:3401956340195634029601005Shigella sonnei Ss046, complete genome3e-1373.9
NC_004547:3207776:3226143322614332273961254Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeintegrase5e-1373.2
NC_016832:948029:9751729751729764461275Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,CP4-like integrase6e-1372.8
NC_011745:2209288:2237821223782122390951275Escherichia coli ED1a chromosome, complete genomeProphage integrase7e-1372.4
NC_008253:4735418:4735418473541847366801263Escherichia coli 536, complete genomeprophage P4 integrase1e-1272
NC_011750:4947500:4950895495089549520851191Escherichia coli IAI39 chromosome, complete genomeputative integrase; KpLE2 phage-like element1e-1272
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein1e-1271.6
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein1e-1271.6
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein1e-1271.6
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1271.6
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1271.6
NC_000913:4494773:4494773449477344959631191Escherichia coli K12, complete genomeKpLE2 phage-like element; predicted integrase1e-1271.6
NC_010473:4596500:4596581459658145977711191Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; predicted integrase1e-1271.6
AC_000091:4501430:4501430450143045026201191Escherichia coli W3110 DNA, complete genomepredicted integrase1e-1271.6
NC_012947:3917619:3932940393294039341301191Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase1e-1271.6
NC_012967:4473368:4479978447997844811681191Escherichia coli B str. REL606 chromosome, complete genomeputative integrase1e-1271.6
NC_009436:522649:5237605237605250221263Enterobacter sp. 638, complete genomephage integrase family protein2e-1271.2
NC_013941:5192500:519570751957075196612906Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage P4 integrase3e-1270.9
NC_012880:2871480:2879871287987128811571287Dickeya dadantii Ech703, complete genomeintegrase family protein3e-1270.5
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-1270.5
NC_002695:5352554:535752053575205358347828Escherichia coli O157:H7 str. Sakai, complete genomeputative integrase3e-1270.5
NC_011353:5426793:543116854311685431995828Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage P4 integrase3e-1270.5
NC_002655:5382557:538744553874455388350906Escherichia coli O157:H7 EDL933, complete genomepartial putative integrase3e-1270.5
NC_013008:5382917:538715153871515388056906Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase3e-1270.5
NC_015663:1902344:1922832192283219240881257Enterobacter aerogenes KCTC 2190 chromosome, complete genomeprothage integrase4e-1270.1
NC_010468:1816359:1844582184458218458441263Escherichia coli ATCC 8739, complete genome4e-1270.1
NC_013421:1696746:1714725171472517160021278Pectobacterium wasabiae WPP163, complete genomeintegrase family protein6e-1269.3
CP002185:4750571:4754674475467447559421269Escherichia coli W, complete genome8e-1269.3
NC_016612:2009927:2022458202245820237231266Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage integrase family protein9e-1268.9
NC_013971:3296272:3324214332421433254911278Erwinia amylovora ATCC 49946 chromosome, complete genomeintegrase1e-1168.6
NC_013961:441719:4457984457984470751278Erwinia amylovora, complete genomeIntegrase1e-1168.6
NC_004547:3207776:3236381323638132376671287Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeintegrase1e-1168.6
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector1e-1168.6
NC_016514:506611:5140645140645153201257Enterobacter cloacae EcWSU1 chromosome, complete genomeprophage P4 integrase2e-1168.2
NC_015968:3301958:3321719332171933230081290Enterobacter asburiae LF7a chromosome, complete genomeintegrase family protein3e-1167.4
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein3e-1167.4
NC_009648:3720000:372189037218903722753864Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative phage integrase2e-1167.4
NC_004547:1873390:1925682192568219269591278Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage integrase2e-1167.4
NC_015733:715947:7195827195827208771296Pseudomonas putida S16 chromosome, complete genomephage integrase family protein4e-1167
NC_013592:446092:4505684505684518211254Dickeya dadantii Ech586, complete genomeintegrase family protein6e-1166.2
NC_020418:116500:1488691488691501371269Morganella morganii subsp. morganii KT, complete genomeprophage integrase6e-1166.2
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family9e-1165.9
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family9e-1165.9
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp9e-1165.9
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp9e-1165.9
NC_020418:116500:1294051294051306791275Morganella morganii subsp. morganii KT, complete genomeprophage integrase8e-1165.9
NC_020063:4127161:4140010414001041412631254Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase9e-1165.5
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family2e-1064.3
NC_013421:553193:570784570784571158375Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family2e-1064.3
NC_013892:3278647:3282924328292432841951272Xenorhabdus bovienii SS-2004 chromosome, complete genomeKpLE2 phage-like element; P4-like integrase3e-1063.9
NC_010694:436500:4418324418324428841053Erwinia tasmaniensis, complete genomePutative P4-type integrase3e-1063.9
NC_012125:4716000:4722575472257547238221248Salmonella enterica subsp. enterica serovar Paratyphi C strainintegrase3e-1063.9
NC_011283:5011497:5023932502393250252061275Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase4e-1063.5
NC_011741:4570498:4575920457592045771701251Escherichia coli IAI1 chromosome, complete genomeProphage integrase5e-1063.2
NC_004337:4374500:4394738439473843959491212Shigella flexneri 2a str. 301, complete genomeputative P4-type integrase5e-1063.2
NC_004741:4364235:4386934438693443881451212Shigella flexneri 2a str. 2457T, complete genomeputative P4-type integrase5e-1063.2
NC_017328:4417000:4438449443844944396601212Shigella flexneri 2002017 chromosome, complete genomeputative P4-type integrase5e-1063.2
CU928160:4570498:4575920457592045771701251Escherichia coli IAI1 chromosome, complete genomeProphage integrase5e-1063.2
NC_008258:4345400:4363338436333843645311194Shigella flexneri 5 str. 8401, complete genomeputative P4-type integrase6e-1062.8
NC_012214:1650523:1670282167028216714991218Erwinia pyrifoliae Ep1/96, complete genomePhage integrase family protein7e-1062.4
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein8e-1062.4
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein8e-1062.4
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein8e-1062.4
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein8e-1062.4
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein8e-1062.4
NC_003198:4676536:4683853468385346851181266Salmonella enterica subsp. enterica serovar Typhi str. CT18,integrase1e-0962
NC_004631:4661000:4666742466674246680071266Salmonella enterica subsp. enterica serovar Typhi Ty2, completeintegrase1e-0962
NC_016845:575123:5819525819525832141263Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative P4-type integrase1e-0962
NC_016445:984856:986816986816987145330Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein1e-0962
NC_010067:3204682:3207340320734032085991260Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0961.6
NC_016830:381049:3948993948993959811083Pseudomonas fluorescens F113 chromosome, complete genomeintegrase2e-0961.2
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068872e-0961.2
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family2e-0961.2
NC_011283:1811000:1879467187946718807351269Klebsiella pneumoniae 342 chromosome, complete genomeintegrase2e-0961.2
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector2e-0960.8
NC_009648:5119271:5126372512637251278591488Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative phage integrase3e-0960.8
NC_014306:4376012:4416594441659444178471254Erwinia billingiae Eb661, complete genomeIntegrase3e-0960.8
NC_007712:3629358:364218736421873643062876Sodalis glossinidius str. 'morsitans', complete genomeputative phage integrase3e-0960.5
NC_014500:443874:4519574519574532191263Dickeya dadantii 3937 chromosome, complete genomeIntegrase3e-0960.5
NC_007613:4217557:4227410422741042286751266Shigella boydii Sb227, complete genomeputative P4-type integrase3e-0960.5
NC_012912:4194821:4203430420343042046891260Dickeya zeae Ech1591, complete genomeintegrase family protein3e-0960.5
NC_012880:4117376:4124824412482441260831260Dickeya dadantii Ech703, complete genomeintegrase family protein3e-0960.5
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein3e-0960.5
NC_011283:1811000:1864670186467018659201251Klebsiella pneumoniae 342 chromosome, complete genomeintegrase3e-0960.5
NC_012731:560199:5662635662635679451683Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeintegrase3e-0960.5
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family4e-0960.1
NC_011080:4703266:4709793470979347110581266Salmonella enterica subsp. enterica serovar Newport str. SL254,integrase5e-0959.7
NC_010501:5442000:5448592544859254499111320Pseudomonas putida W619, complete genomeintegrase family protein5e-0959.7
NC_020181:527592:5664205664205676761257Enterobacter aerogenes EA1509E, complete genomeIntegrase7e-0959.3
NC_012912:1701231:1731524173152417327951272Dickeya zeae Ech1591, complete genomeintegrase family protein1e-0858.5
NC_017047:2079368:2111770211177021128821113Rahnella aquatilis HX2 chromosome, complete genomeintegrase family protein1e-0858.5
NC_013421:478586:4830894830894843481260Pectobacterium wasabiae WPP163, complete genomeintegrase family protein1e-0858.2
NC_007492:3462929:3504962350496235062781317Pseudomonas fluorescens PfO-1, complete genomePhage integrase2e-0858.2
NC_011149:1987291:1996529199652919978031275Salmonella enterica subsp. enterica serovar Agona str. SL483,integrase2e-0857.8
NC_011601:2139188:2171614217161421728821269Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase2e-0857.8
NC_009381:3680638:3701106370110637023651260Yersinia pestis Pestoides F chromosome, complete genomeintegrase2e-0857.8
NC_013421:1819036:1844711184471118459821272Pectobacterium wasabiae WPP163, complete genomeintegrase family protein2e-0857.8
NC_011274:2044000:2052521205252120538611341Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage integrase2e-0857.8
NC_011205:2180598:2188380218838021896541275Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853integrase2e-0857.8
NC_016831:947281:9806799806799819531275Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphage integrase2e-0857.8
NC_011294:2053991:2061363206136320626371275Salmonella enterica subsp. enterica serovar Enteritidis strphage integrase2e-0857.8
NC_009348:4135002:4156238415623841574521215Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase3e-0857
NC_013592:1668092:1675312167531216765951284Dickeya dadantii Ech586, complete genomeintegrase family protein7e-0855.8
NC_016818:2836851:2844402284440228456701269Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeIntegrase1e-0755.5
NC_014500:3097362:3126671312667131279541284Dickeya dadantii 3937 chromosome, complete genomeIntegrase1e-0755.5
NC_010159:2164500:2196574219657421978361263Yersinia pestis Angola, complete genomesite-specific recombinase, phage integrase family2e-0754.7
NC_003143:2137945:2169863216986321711251263Yersinia pestis CO92, complete genomeintegrase2e-0754.7
NC_004088:2640440:2645673264567326469351263Yersinia pestis KIM, complete genomeprophage integrase2e-0754.7
NC_005810:1794490:1826607182660718278691263Yersinia pestis biovar Microtus str. 91001, complete genomeintegrase2e-0754.7
NC_008150:1420825:1452942145294214542041263Yersinia pestis Antiqua, complete genomeintegrase2e-0754.7
NC_009381:1362471:1365074136507413663361263Yersinia pestis Pestoides F chromosome, complete genomeintegrase2e-0754.7
NC_017154:2137500:2169431216943121706931263Yersinia pestis D106004 chromosome, complete genomeintegrase2e-0754.7
NC_017160:2362002:2367208236720823684701263Yersinia pestis D182038 chromosome, complete genomeintegrase2e-0754.7
NC_020181:527592:5321935321935334551263Enterobacter aerogenes EA1509E, complete genomeIntegrase2e-0754.7
NC_013716:2139952:2167956216795621692181263Citrobacter rodentium ICC168, complete genomeintegrase4e-0753.5
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein3e-0650.8
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein3e-0650.8
NC_010067:892729:917068917068917343276Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0650.8
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp3e-0650.4
NC_014500:1066911:1087070108707010883291260Dickeya dadantii 3937 chromosome, complete genomeIntegrase6e-0649.7