Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:3956630 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
395663039578951266site-specific recombinase phage integrase family proteinQuickGO ontologyBLASTP
39580123958632621ISSfl4 ORF3QuickGO ontologyBLASTP
39588863959560675ISSfl4 ORF1QuickGO ontologyBLASTP
39595573959904348ISSfl4 ORF2QuickGO ontologyBLASTP
39611733962117945DNA helicase IIQuickGO ontologyBLASTP
39622263962759534outer membrane invasion proteinQuickGO ontologyBLASTP
39633473963523177hypothetical proteinBLASTP
39653553965474120hypothetical protein
396575439674031650Ent proteinQuickGO ontologyBLASTP
39674763967622147hypothetical protein
39680113969000990NleBQuickGO ontologyBLASTP
39690493969723675NleEQuickGO ontologyBLASTP
39738613974208348IS66 family element orf2QuickGO ontologyBLASTP
397425839757961539IS66 family element transposaseQuickGO ontologyBLASTP
39758643976022159IS66 family transposase OrfAQuickGO ontologyBLASTP
39760193976369351IS66 family element orf2QuickGO ontologyBLASTP
39780773978247171transposase InsF for insertion sequence IS3ABCDEfAQuickGO ontologyBLASTP
39782133978332120hypothetical protein
397849139798071317low-affinity inorganic phosphate transporter 2QuickGO ontologyBLASTP
398009939819581860bifunctional glutathionylspermidine amidaseglutathionylspermidine synthetaseQuickGO ontologyBLASTP
39821633983029867glutathione S-transferaseQuickGO ontologyBLASTP