Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:381049 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
381049381975927LysR family transcriptional regulatorQuickGO ontologyBLASTP
382794382997204YafQ toxin proteinQuickGO ontologyBLASTP
383094383504411hypothetical proteinBLASTP
383504384181678res domain proteinQuickGO ontologyBLASTP
3842973854541158hypothetical proteinBLASTP
3856223872291608methyl-accepting chemotaxis protein I serine chemoreceptor proteinQuickGO ontologyBLASTP
387492387770279hypothetical proteinBLASTP
389572390435864hypothetical proteinBLASTP
390447391127681putative repressor protein from prophageQuickGO ontologyBLASTP
391131391964834hypothetical proteinBLASTP
392430393407978phage integraseQuickGO ontologyBLASTP
3948993959811083integraseQuickGO ontologyBLASTP
396542397366825SAM-dependent methyltransferaseQuickGO ontologyBLASTP
3976983989301233SAM-dependent methyltransferaseQuickGO ontologyBLASTP
398911399600690Amino acid ABC transporter permease proteinQuickGO ontologyBLASTP
399597400292696protein ArtQQuickGO ontologyBLASTP