Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:1938975 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
193897519400331059putative outer membrane pore proteinQuickGO ontologyBLASTP
19401151940249135hypothetical proteinBLASTP
19406291941480852chaperone protein HchAQuickGO ontologyBLASTP
194158819429461359putative sensor-like histidine kinase YedVQuickGO ontologyBLASTP
19429461943728783probable transcriptional regulatory protein YedWQuickGO ontologyBLASTP
19437501944163414transthyretin-like protein precursorQuickGO ontologyBLASTP
19442721944505234hypothetical proteinBLASTP
19446401945275636hypothetical proteinBLASTP
19452761945911636hypothetical protein YedZQuickGO ontologyBLASTP
19461691946819651hypothetical protein YodAQuickGO ontologyBLASTP
19468551947184330hypothetical proteinBLASTP
194766719488871221phage-related integraseQuickGO ontologyBLASTP
194900119508211821hypothetical proteinBLASTP
195093619523991464PilV-like proteinQuickGO ontologyBLASTP
19524521953009558putative type IV pilin protein precursorQuickGO ontologyBLASTP
19534081953713306hypothetical proteinBLASTP
195435919558611503hypothetical proteinBLASTP
19559781956841864hypothetical proteinBLASTP
19571361957369234hypothetical protein
19576191958455837hypothetical proteinBLASTP
19585151958790276hypothetical proteinBLASTP
19588011959331531hypothetical proteinBLASTP
19597641960237474hypothetical proteinBLASTP
19602691960439171hypothetical proteinBLASTP
196072719618991173hypothetical proteinBLASTP
19619601962922963hypothetical proteinBLASTP
19642761964857582hypothetical proteinBLASTP
19649421965673732hypothetical proteinBLASTP
19658471966326480hypothetical proteinBLASTP
19664871966891405putative DNA-binding proteinQuickGO ontologyBLASTP
19669551967305351hypothetical proteinBLASTP
19674141967656243hypothetical proteinBLASTP
19677291968025297hypothetical proteinBLASTP
19680781968368291hypothetical proteinBLASTP
19684501968668219putative regulatory proteinQuickGO ontologyBLASTP
19688851969721837hypothetical proteinBLASTP
1970000197008990tRNA-SerQuickGO ontologyBLASTP
19701831970980798hypothetical protein YeeIQuickGO ontologyBLASTP
1971081197115676tRNA-AsnQuickGO ontologyBLASTP
197153719725801044P4-like integraseQuickGO ontologyBLASTP
197277419740781305probable salicylate synthetase YbtSQuickGO ontologyBLASTP
197410619754941389putative cytoplasmic transmembrane proteinQuickGO ontologyBLASTP
197537919771811803inner membrane ABC-transporter YbtQQuickGO ontologyBLASTP
197716819788801713putative inner membrane ABC-transporter YbtPQuickGO ontologyBLASTP
19791371980096960yersiniabactin transcriptional regulator YbtAQuickGO ontologyBLASTP
198028719863946108yersiniabactin biosynthetic proteinQuickGO ontologyBLASTP
198648219959739492yersiniabactin biosynthetic proteinQuickGO ontologyBLASTP
199597019970701101yersiniabactin biosynthetic protein YbtUQuickGO ontologyBLASTP
19970821997870789yersiniabactin biosynthetic protein YbtTQuickGO ontologyBLASTP
199787419994511578yersiniabactin siderophore biosynthetic protein YbtEQuickGO ontologyBLASTP
199958220016032022pesticin receptor precursorQuickGO ontologyBLASTP