Pre_GI Gene

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Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:4676536 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
467653646780471512leucyl aminopeptidaseQuickGO ontologyBLASTP
467844246795421101putative inner membrane proteinQuickGO ontologyBLASTP
467954246806241083putative inner membrane proteinQuickGO ontologyBLASTP
46808304681828999regulatory proteinQuickGO ontologyBLASTP
468189246833821491BLASTP
4683605468368985tRNA-LeuQuickGO ontologyBLASTP
468385346851181266integraseQuickGO ontologyBLASTP
468518146862571077protein kinaseQuickGO ontologyBLASTP
468625446873271074protein kinaseQuickGO ontologyBLASTP
468730246884651164hypothetical proteinBLASTP
46887414689307567phage polarity suppression proteinQuickGO ontologyBLASTP
46893234689562240bacteriophage gene regulatory proteinQuickGO ontologyBLASTP
46895664690426861putative phage capsid proteinQuickGO ontologyBLASTP
46908494691172324phage DNA binding proteinQuickGO ontologyBLASTP
46912734691656384phage immunity repressor proteinQuickGO ontologyBLASTP
46916534691880228hypothetical proteinBLASTP
46918774692197321hypothetical P4 phage proteinQuickGO ontologyBLASTP
469221246945452334Bacteriophage P4 DNA primaseQuickGO ontologyBLASTP
46947674694907141hypothetical proteinBLASTP
46949974695146150hypothetical secreted proteinQuickGO ontologyBLASTP
469545746965111055BLASTP
46969584697451494BLASTP
46975764698328753fimbrial chaperone proteinQuickGO ontologyBLASTP
469833347008492517outer membrane fimbrial usher proteinQuickGO ontologyBLASTP
47008464701288443BLASTP
47013284702139812BLASTP
47027164702925210probable regulatory proteinQuickGO ontologyBLASTP
47029104703260351putative gerE-family regulatory proteinQuickGO ontologyBLASTP
47035054704156652
47043464705191846putative outer membrane proteinQuickGO ontologyBLASTP
47054544706288835BLASTP
470639947101483750helicase related proteinQuickGO ontologyBLASTP
471018647127232538DEAD-box helicase-related proteinQuickGO ontologyBLASTP
471273647160353300hypothetical proteinBLASTP