Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:4716000 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47160214716998978regulatory proteinQuickGO ontologyBLASTP
471708347184021320GntP family L-idonate transport proteinQuickGO ontologyBLASTP
47184644719228765gluconate 5-dehydrogenaseQuickGO ontologyBLASTP
471925347202841032L-idonate 5-dehydrogenaseQuickGO ontologyBLASTP
47205014721031531D-gluconate kinaseQuickGO ontologyBLASTP
472105947220781020alcohol dehydrogenaseQuickGO ontologyBLASTP
4722301472238585tRNA-LeuQuickGO ontologyBLASTP
472257547238221248integraseQuickGO ontologyBLASTP
47238924724803912hypothetical proteinBLASTP
47258324726707876replication proteinQuickGO ontologyBLASTP
47272274727640414hypothetical proteinBLASTP
47279584728128171hypothetical proteinBLASTP
472891647301751260hypothetical proteinBLASTP
47301534730485333hypothetical proteinBLASTP
47311214731426306hypothetical proteinBLASTP
47315604731676117hypothetical protein
473180747330781272hypothetical proteinBLASTP
473308347351762094hypothetical proteinBLASTP
473577647368761101hypothetical proteinBLASTP
47374764738351876hypothetical proteinBLASTP
47388294739545717hypothetical proteinBLASTP
47417404741997258hypothetical proteinBLASTP
47422784742406129hypothetical protein
47424854743093609hypothetical proteinBLASTP
47434474744358912hypothetical proteinBLASTP
47443614744474114hypothetical proteinBLASTP
47445354744663129hypothetical proteinBLASTP
47447074745024318hypothetical proteinBLASTP
47450214745695675hypothetical proteinBLASTP
47460454746818774DNA-binding transcriptional repressor UxuRQuickGO ontologyBLASTP
474681947478321014tryptophanyl-tRNA synthetase IIQuickGO ontologyBLASTP
47481294748281153hypothetical proteinBLASTP
47486354749081447cytoplasmic proteinQuickGO ontologyBLASTP
47493204750054735aspartate racemaseQuickGO ontologyBLASTP