Pre_GI Gene

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Host: NC_002655 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002655:3919545 Escherichia coli O157:H7 EDL933, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (substrain) is considered a reference strain of O157:H7, which was first isolated during an outbreak in 1982. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora.E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
391954539208101266putative pathogenicity island integraseQuickGO ontologyBLASTP
39209273921712786unknown protein encoded by ISEc8QuickGO ontologyBLASTP
39218013922475675unknown protein encoded by ISEc8QuickGO ontologyBLASTP
39224723922819348unknown protein encoded by ISEc8QuickGO ontologyBLASTP
392283939242871449unknown protein encoded by ISEc8QuickGO ontologyBLASTP
39240883925032945hypothetical proteinBLASTP
3924862392493675hypothetical protein
39251413925674534putative PagC-like membrane proteinQuickGO ontologyBLASTP
39262623926462201hypothetical proteinBLASTP
39267493927303555hypothetical proteinBLASTP
39271423927882741putative transposaseQuickGO ontologyBLASTP
39283563928526171hypothetical proteinBLASTP
392867039303191650putative enterotoxinQuickGO ontologyBLASTP
3930621393067454hypothetical protein
39309273931916990hypothetical proteinBLASTP
39319653932639675hypothetical proteinBLASTP
39330173933862846putative transposaseQuickGO ontologyBLASTP
3933941393399454hypothetical protein
393451439358151302putative cytotoxinQuickGO ontologyBLASTP
39358213936648828putative cytotoxinQuickGO ontologyBLASTP
39366883937335648IS629 transposaseQuickGO ontologyBLASTP
39375753937901327unknown protein in IS629QuickGO ontologyBLASTP
39380923938439348unknown protein encoded by ISEc8QuickGO ontologyBLASTP
393848939400271539unknown protein encoded by ISEc8QuickGO ontologyBLASTP
39402503940600351unknown protein encoded by ISEc8QuickGO ontologyBLASTP
394081339422161404unknown protein encoded by ISEc8QuickGO ontologyBLASTP
394272239440381317partial putative transport proteinQuickGO ontologyBLASTP
394433039461891860glutathionylspermidine synthetaseamidaseQuickGO ontologyBLASTP