Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:3676146 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
367614636774111266Site-specific recombinase phage integrase family proteinQuickGO ontologyBLASTP
36775283678313786hypothetical proteinBLASTP
36784023679076675ISSfl3 OrfAQuickGO ontologyBLASTP
36790733679420348ISSfl4 ORF2QuickGO ontologyBLASTP
367944036808881449transposase-like proteinQuickGO ontologyBLASTP
36806893681633945DNA helicase IIQuickGO ontologyBLASTP
36817423682383642hypothetical proteinBLASTP
36828643683064201hypothetical proteinBLASTP
36848363685063228ST51 proteinQuickGO ontologyBLASTP
368527136869201650Ent proteinQuickGO ontologyBLASTP
36885663689240675ST47 proteinQuickGO ontologyBLASTP
36899993690463465transposaseQuickGO ontologyBLASTP
369111537007869672EHEC factor for adherenceQuickGO ontologyBLASTP
37009583701353396transposase-like proteinQuickGO ontologyBLASTP
37014403701865426transposase-like proteinQuickGO ontologyBLASTP
37018623702212351IS66 family transposase orfBQuickGO ontologyBLASTP
370242537038281404transposase-like proteinQuickGO ontologyBLASTP
37038483704105258IS3QuickGO ontologyBLASTP
37042503704447198hypothetical proteinBLASTP
37046923705117426hypothetical proteinBLASTP
37051143705497384DNA-directed RNA polymerase beta subunit140 kD subunitQuickGO ontologyBLASTP
37063973706591195hypothetical proteinBLASTP
37068403707028189hypothetical proteinBLASTP
37077433707949207transcriptional regulatorQuickGO ontologyBLASTP
37080443708646603hypothetical proteinBLASTP