Pre_GI Gene

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Host: NC_014500 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014500:3097362 Dickeya dadantii 3937 chromosome, complete genome

Host Lineage: Dickeya dadantii; Dickeya; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Strain 3937 is a wild-type strain isolated from Saintpaulia ionantha plants in the early 1980s. Dickeya dadantii formerly (Erwinia chrysanthemi) is a phytopathogenic bacterium that causes soft rot diseases on many crops. This organism produces pectinolytic enzymes which break down plant cell walls allowing for the spread of disease.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30973623097739378Soluble cytochrome b562QuickGO ontologyBLASTP
30977723097987216hypothetical protein
309814630994261281endo-14-beta-glucanaseQuickGO ontologyBLASTP
309949631007731278pectate lyase pelLQuickGO ontologyBLASTP
31012993101511213hypothetical protein
31014653101776312HolinQuickGO ontologyBLASTP
31017663102254489LysozymeQuickGO ontologyBLASTP
31022513102691441putative regulatory proteinQuickGO ontologyBLASTP
31029163103260345hypothetical protein
31036303103857228hypothetical protein
3104039310412587tRNA-LeuQuickGO ontologyBLASTP
3104134310420774tRNA-CysQuickGO ontologyBLASTP
31042843104565282hypothetical protein
310453631059151380Na driven multidrug efflux pumpQuickGO ontologyBLASTP
31061703106646477R-specific enoyl-CoA hydrataseQuickGO ontologyBLASTP
31068293107554726hydroxyacylglutathione hydrolaseQuickGO ontologyBLASTP
310781331090991287putative cytochrome P450 hydroxylaseQuickGO ontologyBLASTP
310922831118042577dimodular nonribosomal peptide synthetaseQuickGO ontologyBLASTP
31118773112095219hypothetical protein
311214831136021455hypothetical proteinBLASTP
31135993114354756hypothetical protein
311431131177333423hypothetical proteinBLASTP
311773031189231194hypothetical proteinBLASTP
3119390311946576tRNA-GlyQuickGO ontology
31194983119617120hypothetical protein
31196073120155549CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseQuickGO ontologyBLASTP
312021331220451833Excinuclease ABC subunit CQuickGO ontologyBLASTP
31220383122694657Response regulator of the two-component transcriptional regulatory system UvrY-BarA ExpA-ExpS GacA-GacSQuickGO ontologyBLASTP
31228093123174366hypothetical protein
31233453123569225putative cytoplasmic proteinQuickGO ontologyBLASTP
3123902312397776tRNA-LysQuickGO ontologyBLASTP
312430431257071404D-serineD-alanineglycine transporterQuickGO ontologyBLASTP
31254553125715261hypothetical protein
31257743126049276nitrogen assimilation control proteinQuickGO ontologyBLASTP
3126434312650976tRNA-AsnQuickGO ontologyBLASTP
312667131279541284IntegraseQuickGO ontologyBLASTP
31281093128420312hypothetical proteinBLASTP
31294353130361927hypothetical proteinBLASTP
31309073131407501hypothetical proteinBLASTP
313141831357284311Rhs-family proteinQuickGO ontologyBLASTP
31357403136147408hypothetical proteinBLASTP
313616131380141854putative Rhs accessory genetic elementQuickGO ontologyBLASTP
31381273138645519HcpQuickGO ontologyBLASTP
31387603138870111hypothetical protein
31391683139506339hypothetical protein
31393293139574246hypothetical proteinBLASTP
31399043140215312putative regulator for maltose metabolismQuickGO ontologyBLASTP
31402963140550255DNA-binding proteinQuickGO ontologyBLASTP
31406383140886249DNA-binding proteinQuickGO ontologyBLASTP
31408463141106261hypothetical protein
31411853141490306putative regulator for maltose metabolismQuickGO ontologyBLASTP
31416063141884279putative transcriptional regulatorQuickGO ontologyBLASTP
31419983142255258putative transcriptional regulatorQuickGO ontologyBLASTP
31423353142550216hypothetical protein
31428353143077243hypothetical protein
31429323143126195DNA-binding proteinQuickGO ontologyBLASTP
31431433143727585hypothetical proteinBLASTP
31438133144094282hypothetical protein
314414531460251881hypothetical proteinBLASTP
31461313146412282hypothetical protein
31466553146951297putative ATPGTP-binding protein remnantQuickGO ontologyBLASTP
31469823147668687VirB1QuickGO ontologyBLASTP
31476823147963282major pilus subunit of type IV secretion complex VirB2QuickGO ontologyBLASTP
314794131507212781ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex VirB4QuickGO ontologyBLASTP
31507473151463717Minor pilin of type IV secretion complex VirB5QuickGO ontologyBLASTP
31514323151698267hypothetical proteinBLASTP
315171031527381029Integral inner membrane protein of type IV secretion complex VirB6QuickGO ontologyBLASTP
31528263152966141TriF proteinQuickGO ontologyBLASTP
31529593153642684Inner membrane protein forms channel for type IV secretion of T-DNA complex VirB8QuickGO ontologyBLASTP
31536393154532894VirB9QuickGO ontologyBLASTP
315452931557371209Inner membrane protein forms channel for type IV secretion of T-DNA complex VirB10QuickGO ontologyBLASTP
315572731567431017ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex VirB11QuickGO ontologyBLASTP
31567843157086303IncN plasmid KikA proteinQuickGO ontologyBLASTP
31571693157519351hypothetical proteinBLASTP
315774131595461806MobB proteinQuickGO ontologyBLASTP
31595553160301747MobC-like proteinQuickGO ontologyBLASTP
316053431618111278ISEch11 transposaseQuickGO ontologyBLASTP
31619323162837906hypothetical proteinBLASTP
31630243163680657hypothetical proteinBLASTP
31639843164427444hypothetical proteinBLASTP
31646363164929294hypothetical proteinBLASTP
31648963165183288hypothetical protein
31652513165547297hypothetical protein
31655503165864315putative toxin of gyrase inhibiting toxin-antitoxin systemQuickGO ontologyBLASTP
31658673166103237putative antitoxin of gyrase inhibiting toxin-antitoxin systemQuickGO ontologyBLASTP
31664233166659237transposaseQuickGO ontologyBLASTP
31675103167932423hypothetical proteinBLASTP
31679953168390396hypothetical proteinBLASTP
316840431697201317hypothetical protein
31697273170605879putative deoxyribonucleaseQuickGO ontology
31706023171237636hypothetical protein
317127331748993627hemagglutinin proteinQuickGO ontologyBLASTP
3175283318793012648putative cell-wall-anchored protein SasA LPXTG motifQuickGO ontologyBLASTP