Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:4473368 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
44733684474366999DNA-binding transcriptional repressor 5-gluconate-bindingQuickGO ontologyBLASTP
447443344757521320L-idonate and D-gluconate transporterQuickGO ontologyBLASTP
44758154476579765gluconate 5-dehydrogenaseQuickGO ontologyBLASTP
447660344776341032L-idonate 5-dehydrogenaseQuickGO ontologyBLASTP
44778514478414564D-gluconate kinaseQuickGO ontologyBLASTP
447841844794371020putative alcohol dehydrogenase Zn-dependent and NADP-bindingQuickGO ontologyBLASTP
4479633447971785tRNA-LeuQuickGO ontologyBLASTP
447997844811681191putative integraseQuickGO ontologyBLASTP
44814914481826336hypothetical proteinBLASTP
44831524483481330hypothetical proteinBLASTP
448399544853231329IS4 putative transposaseQuickGO ontologyBLASTP
448595044871671218putative sialic acid transporterQuickGO ontologyBLASTP
448717944882971119putative oxidoreductaseQuickGO ontologyBLASTP
44890894489361273IS911 proteinQuickGO ontologyBLASTP
44894174490256840IS911 orfA-like proteinQuickGO ontologyBLASTP
44903724490635264hypothetical protein
449066744926702004secondary glycine betaine transporter BetUQuickGO ontologyBLASTP
44928184493636819IS600 ORF2-like proteinQuickGO ontologyBLASTP
44936724493974303IS600 ORF1-like proteinQuickGO ontologyBLASTP
44947524495165414hypothetical proteinBLASTP
44957224496489768iron-dicitrate transporter ATP-binding subunitQuickGO ontologyBLASTP