Pre_GI Gene

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Host: AP010958 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

AP010958:5090696 Escherichia coli O103:H2 str. 12009 DNA, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
509069650919701275hypothetical proteinBLASTP
50921445092470327putative IS629 transposase OrfAQuickGO ontologyBLASTP
50924705093357888putative IS629 transposase OrfBQuickGO ontologyBLASTP
50936215093971351hypothetical proteinBLASTP
50939685094393426hypothetical proteinBLASTP
509504751047189672Efa1LifA-like proteinQuickGO ontologyBLASTP
51065935107267675T3SS secreted effector NleE-like proteinQuickGO ontologyBLASTP
51073165108305990T3SS secreted effector NleB-like proteinQuickGO ontologyBLASTP
510891351105621650T3SS secreted effector EspL-like proteinQuickGO ontologyBLASTP
51107705110997228hypothetical proteinBLASTP
51125255112923399hypothetical proteinBLASTP
51132415113414174hypothetical proteinBLASTP
51135415113951411PagC-like proteinQuickGO ontologyBLASTP
51142675115142876predicted truncated helicaseQuickGO ontologyBLASTP
511494351163911449hypothetical proteinBLASTP
51164115116758348hypothetical proteinBLASTP
51167555117429675hypothetical proteinBLASTP
51176835118303621hypothetical proteinBLASTP
511842051196851266putative integraseQuickGO ontologyBLASTP
5119883511995876tRNA-PheQuickGO ontologyBLASTP
51200655120640576predicted transcriptional regulatorQuickGO ontologyBLASTP
512067751223741698fused thiol disulfide interchange protein activator of DsbCconserved proteinQuickGO ontologyBLASTP
51223505122688339copper binding protein CutA copper sensitivityQuickGO ontologyBLASTP
512280451241051302C4-dicarboxylate antiporter DcuAQuickGO ontologyBLASTP
512422351256591437aspartate ammonia-lyaseQuickGO ontologyBLASTP