Pre_GI Gene

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Host: NC_011601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:3338888 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
333888833401531266integraseQuickGO ontologyBLASTP
33411443341818675transposase Orf1 of IS683QuickGO ontologyBLASTP
33418153342162348transposase Orf2 of IS683QuickGO ontologyBLASTP
33444843345032549PagC-like membrane proteinQuickGO ontologyBLASTP
33451403345334195hypothetical proteinBLASTP
33475793347812234hypothetical proteinBLASTP
334802033496691650T3SS secreted effector EspL-like proteinQuickGO ontologyBLASTP
33502783351267990T3SS secreted effector NleB-like proteinQuickGO ontologyBLASTP
33513163351990675T3SS secreted effector NleE-like proteinQuickGO ontologyBLASTP
335386433635359672Efa1LifA proteinQuickGO ontologyBLASTP
33641893364614426transposase Orf1 of IS682QuickGO ontologyBLASTP
33646113364961351transposase Orf2 of IS682QuickGO ontologyBLASTP
336517433665771404transposase Orf3 of IS682QuickGO ontologyBLASTP
336691333679591047transposaseQuickGO ontologyBLASTP
33681643368715552general secretion pathway protein YghDQuickGO ontologyBLASTP
336871733698861170GspL-like proteinQuickGO ontologyBLASTP
33698923370869978type II secretion proteinQuickGO ontologyBLASTP
33708663371471606type II secretion proteinQuickGO ontologyBLASTP
33714683371839372type II secretion proteinQuickGO ontologyBLASTP
33718363372399564type II secretion proteinQuickGO ontologyBLASTP