Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3917619 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39176193918386768iron-dicitrate transporter ATP-binding subunitQuickGO ontologyBLASTP
39189433919356414hypothetical proteinBLASTP
39201343920436303transposase IS3IS911 family proteinQuickGO ontologyBLASTP
39204723921290819Integrase catalytic regionQuickGO ontologyBLASTP
392144439234411998cholinecarnitinebetaine transporterQuickGO ontologyBLASTP
39235043923917414hypothetical proteinBLASTP
39247473925019273transposase IS3IS911 family proteinQuickGO ontologyBLASTP
39252403925590351hypothetical proteinBLASTP
39256433925768126hypothetical proteinBLASTP
392581139269291119oxidoreductase domain proteinQuickGO ontologyBLASTP
392694139281581218sialic acid transporterQuickGO ontologyBLASTP
392878539301131329transposase IS4 family proteinQuickGO ontologyBLASTP
393294039341301191integraseQuickGO ontologyBLASTP
3934391393447585tRNA-LeuQuickGO ontologyBLASTP
393467139356901020alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
39356943936257564D-gluconate kinaseQuickGO ontologyBLASTP