Pre_GI Gene

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Host: NC_011750 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011750:4947500 Escherichia coli IAI39 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli IAI39 is a serotype O7:K1 strain from a urinary tract infection. Isolated from the urine of a patient with pyelonephritis in the 1980s in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
494751949485501032L-idonate 5-dehydrogenaseQuickGO ontologyBLASTP
49487674949330564D-gluconate kinaseQuickGO ontologyBLASTP
494933449503531020putative alcohol dehydrogenase Zn-dependent and NADP-bindingQuickGO ontologyBLASTP
4950549495063385tRNA-LeuQuickGO ontologyBLASTP
495089549520851191putative integrase KpLE2 phage-like elementQuickGO ontologyBLASTP
4953920495398263hypothetical protein
49540844954227144hypothetical proteinBLASTP
495477249559891218putative sialic acid transporterQuickGO ontologyBLASTP
495600149571191119putative oxidoreductaseQuickGO ontologyBLASTP
49573404957570231hypothetical proteinBLASTP
49575754957823249hypothetical proteinBLASTP
49579114958087177transposase ORF A fragment IS911QuickGO ontologyBLASTP
49583734959134762transposase fragment IS110 familyQuickGO ontologyBLASTP
49592614960151891transposase ORF B IS629QuickGO ontologyBLASTP
49601484960474327transposase ORF A IS629QuickGO ontologyBLASTP
496050049617861287betaine-carnitine-choline transporter family memberQuickGO ontologyBLASTP
49619344962752819transposase ORF B IS600QuickGO ontologyBLASTP
49632684964212945lipid A biosynthesis KDO2-lauroyl-lipid IVA acyltransferaseQuickGO ontologyBLASTP
49642774965227951regulator of virG proteinQuickGO ontologyBLASTP
496523249663201089Glycosyl transferaseQuickGO ontologyBLASTP
49663234967144822putative polysaccharide deacetylaseQuickGO ontologyBLASTP