Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:2139952 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21399522140797846hypothetical proteinBLASTP
21410412141961921hypothetical proteinBLASTP
21419532142420468patch repair proteinQuickGO ontologyBLASTP
214240121438341434DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
21438852144583699putative phosphohydrolaseQuickGO ontologyBLASTP
21446362144923288hypothetical proteinBLASTP
214553721467121176Outer membrane porin proteinQuickGO ontologyBLASTP
214721221484381227integraseQuickGO ontologyBLASTP
21486822149428747hypothetical protein
21501332150438306hypothetical proteinBLASTP
21506582151263606hypothetical protein
21511652151374210hypothetical protein
215208421535981515putative MobAMobL family mobilization proteinQuickGO ontologyBLASTP
215369721551271431hypothetical proteinBLASTP
21553262155892567putative lipoproteinQuickGO ontologyBLASTP
21562762156764489hypothetical proteinBLASTP
21576832158552870hypothetical protein
21597422160410669putative DNA-binding proteinQuickGO ontologyBLASTP
21605162160995480hypothetical proteinBLASTP
21611522161556405DNA-binding protein H-NSQuickGO ontologyBLASTP
21616302161872243H-NS-like DNA-binding proteinQuickGO ontologyBLASTP
21619722162268297hypothetical proteinBLASTP
21623202162610291hypothetical proteinBLASTP
21626912162930240hypothetical proteinBLASTP
21630972163942846hypothetical proteinBLASTP
2164234216432087tRNA-SerQuickGO ontologyBLASTP
21644142165211798hypothetical proteinBLASTP
2165311216538373tRNA-AsnQuickGO ontology
21654232166373951LysR-family transcriptional regulatorQuickGO ontologyBLASTP
21664742167391918nitrogen assimilation regulatory proteinQuickGO ontologyBLASTP
2167719216779173tRNA-AsnQuickGO ontology
216795621692181263integraseQuickGO ontologyBLASTP
21697072170675969IS102 transposaseQuickGO ontologyBLASTP
21709532171840888putative DNA binding proteinQuickGO ontologyBLASTP
21719782172280303hypothetical proteinBLASTP
21728122173108297hypothetical protein
21735162173686171BLASTP
21737022174670969hypothetical proteinBLASTP
21746702174852183hypothetical protein
21748762175232357hypothetical proteinBLASTP
217526021764591200hypothetical proteinBLASTP
21764642177003540hypothetical protein
21773212177524204hypothetical proteinBLASTP
21784322179325894hypothetical proteinBLASTP
21793252179882558hypothetical proteinBLASTP
218030421831202817putative outer membrane autotransporterQuickGO ontologyBLASTP
21833942184323930putative lipoproteinQuickGO ontologyBLASTP
21844052184995591hypothetical protein
21849522185596645hypothetical proteinBLASTP
218560321869461344hypothetical proteinBLASTP
218694321882531311hypothetical proteinBLASTP
218825021892751026hypothetical proteinBLASTP
218927521906211347hypothetical proteinBLASTP
219062121919791359hypothetical proteinBLASTP
219201921935511533hypothetical proteinBLASTP
21935442194269726hypothetical proteinBLASTP
21944032195161759hypothetical protein
219546721967831317shikimate transporterQuickGO ontologyBLASTP