Pre_GI: BLASTP Hits

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Query: NC_013716:2139952:2178432 Citrobacter rodentium ICC168, complete genome

Start: 2178432, End: 2179325, Length: 894

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:3866439:387526438752643876157894Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-99362
NC_007759:512477:524710524710525597888Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein3e-29129
NC_014307:233045:262300262300262947648Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein2e-1996.7
NC_007519:3326918:333500133350013335693693Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein1e-1790.9