Pre_GI: BLASTP Hits

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Query: NC_013716:2139952:2156276 Citrobacter rodentium ICC168, complete genome

Start: 2156276, End: 2156764, Length: 489

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011274:2044000:206545920654592065947489Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-74277
NC_004431:2185750:220659422065942207082489Escherichia coli CFT073, complete genomehypothetical protein6e-74275
NC_011149:1987291:200894920089492009422474Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-72271
NC_011601:2139188:215602221560222156495474Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-72269
NC_016831:947281:968591968591969064474Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein8e-72268
NC_011205:2180598:220136422013642201837474Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-72268
NC_008253:1938975:195976419597641960237474Escherichia coli 536, complete genomehypothetical protein2e-71267
NC_008800:1090000:110516611051661105807642Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-0753.5
NC_012968:239476:241940241940242479540Methylotenera mobilis JLW8, complete genomehypothetical protein5e-0650.1