Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:257059 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2557622571501389hypothetical proteinBLASTP
2570592581081050hypothetical proteinBLASTP
2580722599221851hypothetical proteinBLASTP
259919260344426hypothetical proteinBLASTP
2603492618331485hypothetical proteinBLASTP
261856262359504hypothetical proteinBLASTP
263065263583519hypothetical hemolysin co-regulated proteinQuickGO ontologyBLASTP
2638042657861983Vgr-like proteinQuickGO ontologyBLASTP
2658932669391047hypothetical proteinBLASTP
2669322683711440hypothetical proteinBLASTP
268346268636291hypothetical proteinBLASTP
268894269073180H repeat-associated protein of Rhs elementQuickGO ontologyBLASTP
269350269658309H repeat-associated protein of Rhs elementQuickGO ontologyBLASTP
269887270390504hypothetical proteinBLASTP
270484270972489hypothetical proteinBLASTP
271243272013771possible hydrolaseQuickGO ontologyBLASTP
272167272640474inhibitor of vertebrate lysozyme precursorQuickGO ontologyBLASTP
2726832751272445putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
275367275945579phosphoheptose isomeraseQuickGO ontologyBLASTP
276150276917768putative glutamine amidotransferaseQuickGO ontologyBLASTP
276888277628741putative periplasmic proteinQuickGO ontologyBLASTP
277931278689759putative lipoproteinQuickGO ontologyBLASTP
278865279362498hypothetical proteinBLASTP
279445279654210hypothetical proteinBLASTP
2796822814211740flagellar biosynthetic protein FlhAQuickGO ontologyBLASTP
281381282151771putative chemotaxis membrane proteinQuickGO ontologyBLASTP