Pre_GI Gene

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Host: NC_011748 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011748:4792703 Escherichia coli 55989, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47927034793128426putative transposase OrfA from plasmid originQuickGO ontologyBLASTP
47933564794270915conserved hypothetical protein putative transposase fragmentQuickGO ontologyBLASTP
47943574795040684conserved hypothetical protein putative transposase fragmentQuickGO ontologyBLASTP
47957394796488750hypothetical proteinBLASTP
479636748002243858Serine protease pet precursor Plasmid-encoded toxin petQuickGO ontologyBLASTP
480269548062103516Putative superfamily I DNA helicaseQuickGO ontologyBLASTP
48062994806562264hypothetical proteinBLASTP
480666348079251263Prophage integraseQuickGO ontologyBLASTP
48079894808237249hypothetical proteinBLASTP
4808123480819876tRNA-PheQuickGO ontologyBLASTP
48083054808880576putative transcriptional regulatorQuickGO ontologyBLASTP
480891748106141698thioldisulfide interchange protein precursorQuickGO ontologyBLASTP
48105904810928339divalent-cation tolerance protein CutAQuickGO ontologyBLASTP