Pre_GI Gene

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Host: NC_004431 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004431:4955658 Escherichia coli CFT073, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
495565849569651308Regulatory proteinQuickGO ontologyBLASTP
495696249589712010Regulatory proteinQuickGO ontologyBLASTP
495895249602081257Transport activatorQuickGO ontologyBLASTP
49611894961833645hypothetical proteinBLASTP
49618544962162309hypothetical proteinBLASTP
49622024962357156hypothetical proteinBLASTP
49622844962847564Hypothetical protein ybdMQuickGO ontologyBLASTP
496283249640641233Hypothetical protein ybdNQuickGO ontologyBLASTP
49642004964853654hypothetical proteinBLASTP
496503849664981461hypothetical proteinBLASTP
49657754965957183hypothetical protein
49666574967547891Putative Transposase for IS629QuickGO ontologyBLASTP
49675444967870327Unknown protein of IS629 encoded within prophageQuickGO ontologyBLASTP
496792249696851764hypothetical proteinBLASTP
497012549713871263Prophage P4 integraseQuickGO ontologyBLASTP
4971585497166076tRNA-PheQuickGO ontologyBLASTP
49717674972366600Protein yjdCQuickGO ontologyBLASTP
497237949740761698thioldisulfide interchange protein precursorQuickGO ontologyBLASTP
49740524974396345Periplasmic divalent cation tolerance protein cutAQuickGO ontologyBLASTP
497450649758071302anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
497590749773581452hypothetical protein
497592549774061482Aspartate ammonia-lyaseQuickGO ontologyBLASTP
49776984978174477FxsA proteinQuickGO ontologyBLASTP
497819049795061317Hypothetical protein yjeHQuickGO ontologyBLASTP